Skip to main content
. 2017 Feb 2;7:41457. doi: 10.1038/srep41457

Table 2. Classification of repetitive sequences in the H. brasiliensis genome assembly.

Repeat element Number of loci Length occupied (bp) Percentage of the assembly
DNA transposons 58,210 21,004,842 1.67
Retrotransposons:
 LINE 43,421 21,703,411 1.73
 SINE 1,402 404,943 0.03
 LTR: Gypsy 792,203 474271360 37.75
 LTR: Copia 194,673 128587832 10.24
 LTR: others 99,248 44,783,869 3.56
Simple repeats 289782 13,970,828 1.11
Low complexity 62563 3,522,906 0.28
Unclassified 578157 159,991,742 12.74