Table 1. Genes with significant (q=0) differential expression in pineal gland and/or hippocampus between animals subjected to LMS, BMS and NH controls.
| Probe ID | Gene ID | Gene symbol | Gene name | Fold differencea |
|---|---|---|---|---|
| Pineal gland | ||||
| BMS vs NH | ||||
| ILMN_1375780 | 303439 | Maf | Monocyte to macrophage differentiation-associated | 1.23 |
| ILMN_1352420 | 314627 | Plk5 | Polo-like kinase 5 | 1.30 |
| LMS vs NH | ||||
| ILMN_1369757 | 305127 | Zfp644 | Zinc finger protein 644 | −1.24 |
| ILMN_1354493 | 25338 | Ninj1 | Ninjurin 1 | −1.19 |
| ILMN_1368424 | 303702 | Engase | Endo-beta-N-acetylglucosaminidase | −1.15 |
| ILMN_1373511 | 116745 | Kcnh6 | Potassium voltage-gated channel, subfamily H (eag-related), member 6 | 1.27 |
| ILMN_1352420 | 314627 | Plk5 | Polo-like kinase 5 | 1.40 |
| ILMN_1376353 | 311872 | Zbtb43 | Zinc finger and BTB domain containing 43 | 1.43 |
| ILMN_1372167 | 313644 | Rap1ga1 | RAP1, GTPase activating protein 1 | 2.00 |
| LMS vs BMS | ||||
| ILMN_1356838 | 308060 | Ccdc127 | Coiled-coil domain containing 127 | 1.25 |
| ILMN_1373838 | 29694 | Gabrr1 | Gamma-aminobutyric acid (GABA) receptor, rho 1 | 1.32 |
| ILMN_1349159 | 498433 | Psme4 | Proteasome activator subunit 4 | −1.44 |
| Hippocampus | ||||
| LMS vs NH | ||||
| ILMN_1357880 | 64347 | Sncg | Synuclein, gamma (breast cancer-specific protein 1) | −1.60 |
| ILMN_1373010 | 362484 | Plekhf2 | Pleckstrin homology domain containing, family F (with FYVE domain) member 2 | −1.39 |
| ILMN_1373132 | 362134 | Mmadhc | Methylmalonic aciduria and homocystinuria, cblD type | −1.41 |
| ILMN_1373950 | 362685 | Gpatch11 | G patch domain containing 11 | −1.30 |
| ILMN_1369757 | 305127 | Zfp644 | Zinc finger protein 644 | −1.27 |
| ILMN_1370841 | 309391 | Cox15 | COX15 homolog, cytochrome c oxidase assembly protein | 1.09 |
| ILMN_1359640 | 25496 | Notch1 | Notch gene homolog 1 | 1.16 |
| LMS vs BMS | ||||
| ILMN_1356902 | 29131 | Cartpt | CART prepropeptide | −1.24 |
| ILMN_1650165 | 295264 | Mllt11 | Myeloid/lymphoid or mixed-lineage leukemia; translocated to 11 | −1.32 |
Abbreviations: BMS, brief maternal separation; LMS, long maternal separation; NH, non-handled.
a
Positive or negative fold difference indicates up- or downregulation of probe in first vs second group, for example, in BMS vs NH.
Group comparison is indicated in italics. Genes selected for human genetic association study are highlighted in bold.