Table 2.
LOO XERp Results for TBM vs Healthy Controls
| Variable | % Selected | Classification Accuracy % | Average threshold | Direction | ||
|---|---|---|---|---|---|---|
| Control Group | Experimental Group | Overall | ||||
| 4-hydroxyphenylpyruvic acid | 100 | 100 | 82 | 94 | 0 | Up |
| non-annotated-1 | 100 | 100 | 76 | 92 | 0 | Up |
| methylcitric acid | 100 | 94 | 88 | 92 | 0.45 | Up |
| quinolinic acid | 100 | 87 | 94 | 90 | 2.38 | Up |
| 2-hydroxybutyric acid | 100 | 77 | 94 | 83 | 0.31 | Up |
| 2-hydroxyvaleric acid | 100 | 77 | 94 | 83 | 0 | Up |
| phenylacetylglutamine | 100 | 90 | 71 | 83 | 1.02 | Up |
| 3-hydroxyisovaleric acid | 100 | 71 | 100 | 81 | 20.02 | Up |
| 1,4-dihydroxycyclohexane | 100 | 71 | 88 | 77 | 0.23 | Up |
| 2-ketoglutaric acid | 100 | 65 | 82 | 71 | 0.53 | Up |
| uracil | 100 | 61 | 88 | 71 | 0.69 | Up |
| non-annotated-3 | 75 | 100 | 71 | 90 | 0 | Up |
| hexanoic acid | 67 | 65 | 94 | 75 | 0.35 | Down |
| isocitric acid | 33 | 52 | 94 | 67 | 1.67 | Up |
| pyruvic acid | 17 | 81 | 76 | 79 | 0.25 | Up |
The table displays an excerpt of the LOO XERp results. The table is sorted in descending order of the second column (“% Selected”), i.e. the percentage of times a variable (as listed in the first column under “Variable”) was selected out of the LOO iterations. In addition, the table reports the specificity (accurate classification of control subjects) and sensitivity (accurate classification of experimental subjects) percentages in columns 3 and 4, as well as the overall classification accuracy in column 5. Columns 6 and 7 contain the threshold values averaged over all instances the variable was selected (“Average Threshold”) and the direction of the shift found to be significant (“Direction”)