Skip to main content
. 2017 Feb 3;12(2):e0171187. doi: 10.1371/journal.pone.0171187

Table 3. Statistics of microsatellites identification in yellow perch.

Microsatellites identified
Transcriptome sequences 41,479
 Di-nucleotide repeats 31,996
 Tri-nucleotide repeats 7,226
 Tetra-nucleotide repeats 2,088
 Penta-nucleotide repeats 112
 Hexa-nucleotide repeats 57
 Number of microsatellites containing sequences 18,210
NF specifically expressed contigs 0
 any nucleotide repeats 0
NM specifically expressed contigs 133
 Di-nucleotide repeats 110
 Tri-nucleotide repeats 15
 Tetra-nucleotide repeats 8
 Number of microsatellites containing sequences 110
PM specifically expressed contigs 4
 Di-nucleotide repeats 4
 Number of microsatellites containing sequences 4
 Number of microsatellites with sufficient flanking sequence (≥ 50 bp) for PCR primer design
Muscles specifically expressed contigs 93
 Di-nucleotide repeats 76
 Tri-nucleotide repeats 12
 Tetra-nucleotide repeats 3
 Penta-nucleotide repeats 1
 Hexa-nucleotide repeats 1
 Number of microsatellites containing sequences 74
Gonads specifically expressed contigs 1,036
 Di-nucleotide repeats 824
 Tri-nucleotide repeats 159
 Tetra-nucleotide repeats 50
 Penta-nucleotide repeats 3
 Number of microsatellites containing sequences 847