TABLE 2.
Serovar | % Homology | Serovar | % Homology |
---|---|---|---|
A | 83.97 | H | 84.82 |
B | 94.32 | I | 84.14 |
Bab | 94.83 | J | 83.63 |
C | 84.56 | K | 83.80 |
E | 93.38 | L1 | 96.18 |
F | 86.26 | L2 | 92.45 |
Gb | 82.87 | L3 | 84.56 |
Differences due to insertions in relation to the serovar D ompA sequence were not included in the final nucleotide difference calculations. The sequence for the serovar D ompA was obtained from Stephens et al. (31); sequences for all other ompA genes were obtained from Stothard et al. (33), specifically, accession numbers J03813 (A/Har-13), M17342 (B/TW-5), AF063194 (Ba/Apache-2), M17343 (C/TW3), X52557 (E/Bour 1990), X52080 (F/IC-Cal3), AF063199 (G/UW57), X16007 (H/UW4), AF063200 (I/UW12), AF063202 (J/UW36), AF063204 (K/UW31), M36533 (L1/440), M14738 (L2/434), and X55700 (L3/404).
The GenBank-listed sequences for serovars Ba and G truncate the 25 3′-most ends of these genes. It was assumed that these sequences were identical when compared with the D/UW-3/Cx ompA sequence for the above calculations.