Table 3.
Genome Statistics
| Attribute | Value | % of total a |
|---|---|---|
| Genome size (bp) | 5,585,780 | 100.00 |
| DNA coding (bp) | 4,761,339 | 85.24 |
| DNA G + C (bp) | 3,960,974 | 70.91 |
| DNA scaffolds | 1 | - |
| Total genes | 5,104 | - |
| Protein-coding genes | 4,905 | 98.03 |
| RNA genes | 50 | 0.98 |
| Pseudo genes | 149 | 2.98 |
| Genes in internal clusters | 1763 | 34.54 |
| Genes with function prediction | 2,504 | 48.86 |
| Genes assigned to COGs | 2,156 | 42.07 |
| Genes with Pfam domains | 1,734 | 33.97 |
| Genes with signal peptides | 456 | 8.69 |
| Genes with trandmembrane helices | 1230 | 23.43 |
| CPISPR repeats | 0 | - |
a The total is based on either the size of genome in base pairs or the total number of genes in the predicted genome