Table 1.
Genes involved in epigenetic mechanisms differentially modulated in Trincadeira grapes infected with the fungus Botrytis cinerea at green hard stage (EL33) and véraison stage (EL35).
| 12X V1 ID | EL33Inf/EL33Mock significant Fold Change | EL35Inf/EL35Mock significant Fold Change | Functional annotation |
|---|---|---|---|
| VIT_13s0064g01340 | 3,1 | 2,4 | Histone H3 |
| VIT_07s0005g01060 | 3,0 | Histone H1 | |
| VIT_06s0004g03890 | 2,2 | Histone H4 | |
| VIT_04s0023g03130 | 2,2 | Histone H1 | |
| VIT_08s0007g00040 | 2,2 | Histone H4 | |
| VIT_12s0035g00060 | -3,8 | DNA (cytosine-5)-methyltransferase | |
| VIT_12s0034g02560 | -4,0 | DNA (cytosine-5)-methyltransferase (ATHIM) | |
| VIT_06s0004g02600 | -2,3 | MOM1 (maintenance of methylation1) | |
| VIT_01s0010g00020 | -2,5 | 2,0 | DNA-3-methyladenine glycosidase I |
| VIT_17s0000g04900 | -2,2 | ATP-dependent RNA helicase | |
| VIT_05s0020g03760 | -2,2 | RNA helicase SDE3 (SDE3) | |
| VIT_01s0010g00690 | -2,2 | DNA-directed RNA polymerase | |
| VIT_11s0016g03220 | -3,9 | RNA-directed RNA polymerase | |
| VIT_14s0006g00760 | 2,2 | ATP-dependent RNA helicase | |
| VIT_01s0010g03200 | -2,2 | DNA-directed RNA polymerase (RPOT2) | |
| VIT_00s0794g00010 | -2,1 | DEAD/DEAH box RNA helicase protein RH16 | |
| VIT_15s0048g02380 | -2,1 | DCL1 (DICER 1) | |
| VIT_10s0042g01150 | -2,6 | ARGONAUTE 2 (AGO2) | |
| VIT_02s0025g03560 | -2,8 | Transcription factor jumonji (jmjC) DIDO1 | |
| VIT_02s0012g01960 | 2,8 | Transcription factor jumonji (jmj) | |
| VIT_11s0149g00100 | -2,3 | DICER-like 4 | |
| VIT_04s0008g06930 | 2,2 | Transposase, IS4 | |
| VIT_14s0036g01410 | -2,1 | Gag-pol polyprotein | |
| VIT_03s0038g02730 | -2,3 | Mutator-like transposase | |
| VIT_07s0130g00290 | -2,5 | Transposase, IS4 | |
| VIT_04s0069g00030 | -2,9 | Retrotransposon protein | |
| VIT_00s0227g00030 | -3,0 | Gag-pol polyprotein |
Details on microarray analysis available in Agudelo-Romero et al. (2015).