Table 3. Distribution of deletion and duplication events in the non-swede and swede populations.
Gene ID | Chromosome | start | stop | deletions |
duplications |
mean coverage | Gene name | ||
---|---|---|---|---|---|---|---|---|---|
nonswede population | swede population | nonswede population | swede population | ||||||
BnaA08g15780D | chrA08 | 13097823 | 13098361 | 11 | 9 | 0 | 0 | 1641.5 | no annotation |
BnaA09g48410D | chrA09 | 32434233 | 32438771 | 31 | 0 | 10 | 8 | 1136.2 | Bna.PHYA.chrA09 |
BnaA09g57140D | chrA09_random | 4043861 | 4045464 | 1 | 0 | 4 | 8 | 1675.6 | Bna.GA3ox.chrA09.random |
BnaA10g22080D | chrA10 | 14998617 | 15003197 | 2 | 0 | 2 | 9 | 1321.5 | Bna.FLC.chrA10 |
BnaC08g38580D | chrC08 | 34776298 | 34779240 | 9 | 8 | 1 | 0 | 1226.1 | Bna.CCR1.chrC08 |
BnaC08g38810D | chrC08 | 34907098 | 34908735 | 4 | 9 | 0 | 0 | 1581.1 | Bna.GA3ox.chrC08 |
BnaC08g42660D | chrC08 | 36746642 | 36751390 | 6 | 10 | 15 | 0 | 1537.7 | Bna.PHYA.chrC08 |
BnaC08g42670D | chrC08 | 36752307 | 36753108 | 7 | 9 | 14 | 0 | 1660.2 | germin like protein |
BnaC09g46500D | chrC09 | 46345350 | 46350092 | 2 | 9 | 13 | 0 | 1096.9 | Bna.FLC.chrC09 |
BnaC09g46540D | chrC09 | 46366645 | 46371180 | 3 | 9 | 11 | 0 | 1031.5 | Bna.FLC.chrC09 |
The table shows the gene ID, chromosomal position and the number of lines in the respective non-swede and swede populations which carry either a deletion or duplication. The table also gives the mean coverage of the respective gene and the common gene name.