Table S1.
SASBDP entry | SASDBZ7 | SASDB28 | SASDB38 |
Data-collection parameters | C1r2s2 (batch) | C1q (batch) | C1 (inline) |
Instrument | ESERF BM29 | ESRF BM29 | Petra P12 |
Wavelength, Å | 0.992 | 0.992 | 1.24 |
q range, Å−1 | 4.6⋅10−3 to 0.50 (0.25)* | 3.6⋅10−3 to 0.50 | 2.2⋅10−3 to 0.48 (0.25)* |
Exposure time per frame, s | 2 | 2 | 1 |
No. of frames averaged | 10 | 10 | 100 |
Concentration range, mg⋅ml−1 | 1.01–6.79 | 3.66 | N/A |
Temperature, K | 277.15 | 277.15 | 293.15 |
Structural parameters | |||
I(0) [from P(r)] | 436 | 534 | N/A |
Rg, Å [from P(r)] | 130 | 126.6 | 114.6 |
I(0) (from Guinier) | 436 for 1.8 mg⋅ml−1 | 535 | N/A |
Rg, Å (from Guinier) | 126 ± 3.0 | 126 ± 2 | 115 ± 1 |
Dmax, Å | 450 | 450 | 365 |
Porod volume estimate, Å3 | 645 × 103 | 965 × 103 | 2,050 × 103 |
Dry volume calculated from sequence and glycans†, Å3 | 399 × 103 | 563 × 103 | 992 × 103 |
Molecular mass Mr [from I(0)]‡, kDa | 332 | 407 | N/A |
Calculated monomeric Mr from sequence, O-linked glycans, N-linked glycans, hydroxylations, kDa | 330 | 444 | 774 |
Software used | |||
Data processing | PyFAI/EDNA | PyFAI/EDNA | SASFLOW |
Ab initio analysis | N/A | N/A | DAMMIN |
Validation and averaging | N/A | N/A | DAMAVER Suite |
Rigid-body modeling | CORALXL | N/A | CORALXL |
Computation of model intensities | CORALXL | N/A | CORALXL |
The maximum q range used for rigid-body modeling is indicated in the parentheses.
The volume was calculated as Mr times 1.21 Å3/Da for the protein component. A volume of 2,535 Å3 was used for an Asn-linked glycan and 361 Å3 for the O-linked Glc-Gal disaccharide on hydroxylated lysine.
Using BSA with I(0) = 94.52 and Mw = 72 kDa as a standard.