Table 2.
The DEGs involved in flavonoid biosynthesis.
| Gene ID | WF-RPKM | RF-RPKM | Log2 Ratio (RF/WF) | Gene annotation |
|---|---|---|---|---|
| WF VS. RF UP-REGULATING | ||||
| ppa024512m | 0.49 | 10.26 | 4.40 | Leucoanthocyanidin reductase (LAR) |
| ppa014940m | 0.75 | 8.52 | 3.51 | Naringenin 3-dioxygenase (F3H) |
| ppa004937m | 0.32 | 3.54 | 3.47 | Shikimate O-hydroxycinnamoyltransferase (HCT) |
| ppa004436m | 2.52 | 19.21 | 2.93 | Flavonoid 3′-monooxygenase (F3′H) |
| ppa022132m | 0.63 | 4.33 | 2.78 | Flavonoid 3′-monooxygenase (F3′H) |
| ppa008269m | 1.97 | 13.48 | 2.77 | Naringenin 3-dioxygenase (F3H) |
| ppa008603m | 1.36 | 7.20 | 2.40 | Polyketide reductase (PKR) |
| ppa005318m | 15.52 | 79.31 | 2.35 | Shikimate O-hydroxycinnamoyltransferase (HCT) |
| ppa021776m | 1.59 | 7.32 | 2.21 | Flavonol 3-O-methyltransferase (3-OMT) |
| ppa018282m | 1.64 | 7.30 | 2.15 | Trans-cinnamate 4-monooxygenase (C4H) |
| ppa019829m | 3.95 | 15.85 | 2.00 | Leucoanthocyanidin reductase (LAR) |
| ppa004639m | 2.08 | 7.74 | 1.90 | Flavonoid 3′-monooxygenase (F3′H) |
| ppa007511m | 2.20 | 7.76 | 1.82 | Flavonol 3-O-methyltransferase (3-OMT) |
| ppa008529m | 3.92 | 12.19 | 1.64 | Polyketide reductase (PKR) |
| ppa007742m | 3.17 | 9.14 | 1.53 | Flavonol 3-O-methyltransferase (3-OMT) |
| ppa022307m | 54.24 | 145.48 | 1.42 | Shikimate O-hydroxycinnamoyltransferase (HCT) |
| ppa017446m | 16.16 | 42.36 | 1.39 | Leucoanthocyanidin reductase (LAR) |
| ppa004474m | 67.74 | 176.53 | 1.38 | Coumaroylquinate (coumaroylshikimate) 3′-monooxygenase |
| ppa005162m | 106.96 | 272.14 | 1.35 | Anthocyanidin/Flavonol 3-O-glucosyltransferase (3GT/UFGT) |
| ppa012260m | 74.03 | 185.78 | 1.33 | Anthocyanidin/Flavonol 3-O-glucosyltransferase (3GT/UFGT) |
| ppa004473m | 71.89 | 175.73 | 1.29 | Coumaroylquinate (coumaroylshikimate) 3′-monooxygenase |
| ppa004544m | 127.91 | 303.00 | 1.24 | Trans-cinnamate 4-monooxygenase (C4H) |
| ppa005910m | 15.04 | 34.66 | 1.20 | Shikimate O-hydroxycinnamoyltransferase (HCT) |
| ppa016640m | 71.60 | 162.48 | 1.18 | Shikimate O-hydroxycinnamoyltransferase (HCT) |
| ppa004095m | 9.54 | 21.18 | 1.15 | Flavonoid 3′-monooxygenase (F3′H) |
| ppa015221m | 49.65 | 109.32 | 1.14 | Anthocyanidin/Flavonol 3-O-glucosyltransferase (3GT/UFGT) |
| ppa007994m | 24.40 | 49.11 | 1.01 | Leucoanthocyanidin reductase (LAR) |
| ppa004404m | 13.02 | 32.22 | 1.31 | Coumaroylquinate (coumaroylshikimate) 3′-monooxygenase |
| ppa004406m | 5.54 | 11.81 | 1.09 | Coumaroylquinate (coumaroylshikimate) 3′-monooxygenase |
| WF VS. RF DOWN-REGULATING | ||||
| ppa017300m | 14.91 | 1.88 | −2.99 | Flavonoid 3′-monooxygenase (F3′H) |
| ppa019432m | 7.56 | 1.13 | −2.74 | Chalcone synthase (CHS) |
| ppa027160m | 36.72 | 6.73 | −2.45 | Flavonoid 3′-monooxygenase (F3′H) |
| ppa023872m | 109.29 | 21.95 | −2.32 | Leucoanthocyanidin reductase (LAR) |
| ppa019048m | 7.29 | 1.77 | −2.05 | Flavonoid 3′-monooxygenase (F3′H) |
| ppa007719m | 213.00 | 61.33 | −1.80 | Leucoanthocyanidin dioxygenase/ Flavonol synthase |
| ppa005715m | 27.66 | 8.95 | −1.63 | Shikimate O-hydroxycinnamoyltransferase (HCT) |
| ppa015896m | 32.96 | 16.17 | −1.03 | Flavonol 3-O-methyltransferase (3-OMT) |
| ppa005581m | 108.72 | 54.26 | −1.00 | Shikimate O-hydroxycinnamoyltransferase (HCT) |