Table 2.
Top 10 domains relevant for niche classification: Strictly respiratory or multiple tissue types.
| Domain information | Abundance (%)a | ||
|---|---|---|---|
| IDd | InterPro descriptione | Respiratory systemb | Multiplec |
| IPR009061 | DNA binding domain, putative | 40 | 100 |
| IPR000055 | Restriction endonuclease, type I, HsdS | 50 | 94 |
| IPR022749 | N6 adenine-specific DNA methyltransferase, N12 class, N-terminal | 20 | 81 |
| IPR000158 | Cell division protein FtsZ | 40 | 100 |
| IPR011701 | Major facilitator superfamily | 50 | 88 |
| IPR003798 | DNA recombination RmuC | 20 | 75 |
| IPR008280 | Tubulin/FtsZ, C-terminal | 40 | 88 |
| IPR002198 | Short-chain dehydrogenase/reductase SDR | 20 | 75 |
| IPR011089 | Domain of unknown function DUF1524 | 0 | 50 |
| IPR005864 | ATPase, F0 complex, subunit B, bacterial | 60 | 100 |
a
Abundance of a protein domain in the specific niche.
b
Abundance in mycoplasma species with a strictly respiratory niche.
c
Abundance in mycoplasma species with multiple niches including respiratory.
d
InterPro Identifier.
e
Domain description obtained from InterProScan.