Table 3. Assembly and scaffolding statistics for C. canadensis genome: Abyss assembly metrics from 80 M input Illumina reads (24 Gb) (PE 150 bp, 300-400 bp Insert).
Abyss Assembly | Version Name | Number of Contigs | N50 (bp) | Total Base (Gb) | Max Contig Length (Mb) |
---|---|---|---|---|---|
Primary assembly | AB | 312,881 | 17,834 | 2.431 | 0.206 |
Pilon correction | AB1 | 312,881 | 17,834 | 2.431 | 0.261 |
REAPR correction | AB2 | 316,195 | 17,517 | 2.431 | 0.261 |