Table 4. Variants observed between Ward and Horn et al. (2011) beaver mitochondrial assemblies.
| Variant Start | Variant End | Length | Amino Acid Change | CDS Position | Change | Codon Change | Polymorphism Type |
|---|---|---|---|---|---|---|---|
| 1,680 | 1,680 | 1 | C→T | SNP (transition) | |||
| 2,209 | 2,208 | 0 | -TTC | Deletion | |||
| 2,630 | 2,630 | 1 | A→T | SNP (transversion) | |||
| 2,786 | 2,786 | 1 | 30 | C→T | ACC→ACT | SNP (transition) | |
| 3,200 | 3,200 | 1 | 444 | C→T | ATC→ATT | SNP (transition) | |
| 3,296 | 3,296 | 1 | 540 | G→A | CCG→CCA | SNP (transition) | |
| 3,323 | 3,323 | 1 | 567 | A→G | ACA→ACG | SNP (transition) | |
| 3,668 | 3,668 | 1 | 912 | T→C | TAT→TAC | SNP (transition) | |
| 3,688 | 3,688 | 1 | T→M | 932 | C→T | ACA→ATA | SNP (transition) |
| 4,605 | 4,605 | 1 | 684 | T→C | CTT→CTC | SNP (transition) | |
| 4,674 | 4,674 | 1 | 753 | C→T | CTC→CTT | SNP (transition) | |
| 4,770 | 4,770 | 1 | 849 | C→T | GCC→GCT | SNP (transition) | |
| 5,178 | 5,178 | 1 | T→C | SNP (transition) | |||
| 5,409 | 5,409 | 1 | 66 | T→C | TTT→TTC | SNP (transition) | |
| 5,541 | 5,541 | 1 | 198 | T→C | ATT→ATC | SNP (transition) | |
| 5,652 | 5,652 | 1 | 309 | A→G | TGA→TGG | SNP (transition) | |
| 6,312 | 6,312 | 1 | 969 | G→A | TGG→TGA | SNP (transition) | |
| 6,360 | 6,360 | 1 | 1017 | C→T | CTC→CTT | SNP (transition) | |
| 6,522 | 6,522 | 1 | 1179 | T→C | TTT→TTC | SNP (transition) | |
| 7,043 | 7,043 | 1 | 13 | C→T | CTA→TTA | SNP (transition) | |
| 7,453 | 7,453 | 1 | 423 | A→G | CGA→CGG | SNP (transition) | |
| 7,489 | 7,489 | 1 | 459 | A→G | CTA→CTG | SNP (transition) | |
| 7,834 | 7,834 | 1 | 51 | T→C | ATT→ATC | SNP (transition) | |
| 7,909 | 7,909 | 1 | 126 | T→C | GTT→GTC | SNP (transition) | |
| 8,013 | 8,013 | 1 | 69 | T→C | ATT→ATC | SNP (transition) | |
| 8,284 | 8,284 | 1 | I→V | 340 | A→G | ATT→GTT | SNP (transition) |
| 8,651 | 8,651 | 1 | 27 | T→C | CAT→CAC | SNP (transition) | |
| 8,702 | 8,702 | 1 | 78 | C→T | CTC→CTT | SNP (transition) | |
| 8,942 | 8,942 | 1 | 318 | G→A | CTG→CTA | SNP (transition) | |
| 9,356 | 9,356 | 1 | 732 | C→T | TTC→TTT | SNP (transition) | |
| 10,013 | 10,013 | 1 | 120 | T→C | ATT→ATC | SNP (transition) | |
| 10,019 | 10,019 | 1 | 126 | T→C | ATT→ATC | SNP (transition) | |
| 10,036 | 10,036 | 1 | V→A | 143 | T→C | GTC→GCC | SNP (transition) |
| 10,082 | 10,082 | 1 | 189 | T→C | ATT→ATC | SNP (transition) | |
| 10,112 | 10,112 | 1 | 219 | A→G | GTA→GTG | SNP (transition) | |
| 10,519 | 10,519 | 1 | 336 | C→T | GCC→GCT | SNP (transition) | |
| 10,591 | 10,591 | 1 | 408 | A→G | TGA→TGG | SNP (transition) | |
| 10,690 | 10,690 | 1 | N→K | 507 | C→A | AAC→AAA | SNP (transversion) |
| 11,528 | 11,528 | 1 | 1345 | T→C | TTA→CTA | SNP (transition) | |
| 11,734 | 11,734 | 1 | (A)5→(A)6 | Insertion (tandem repeat) | |||
| 12,517 | 12,517 | 1 | 759 | A→G | GTA→GTG | SNP (transition) | |
| 13,366 | 13,366 | 1 | 1608 | G→A | TCG→TCA | SNP (transition) | |
| 13,945 | 13,945 | 1 | G→A | SNP (transition) | |||
| 14,005 | 14,005 | 1 | A→G | SNP (transition) | |||
| 14,466 | 14,466 | 1 | I→V | 304 | A→G | ATC→GTC | SNP (transition) |
| 14,637 | 14,637 | 1 | D→N | 475 | G→A | GAC→AAC | SNP (transition) |
| 14,703 | 14,703 | 1 | F→L | 541 | T→C | TTC→CTC | SNP (transition) |
| 14,837 | 14,837 | 1 | 675 | C→T | ACC→ACT | SNP (transition) | |
| 14,954 | 14,954 | 1 | 792 | T→C | ACT→ACC | SNP (transition) | |
| 15,356 | 15,356 | 1 | (A)5→(A)6 | Insertion (tandem repeat) | |||
| 15,515 | 15,515 | 1 | T→C | SNP (transition) | |||
| 15,544 | 15,544 | 1 | T→C | SNP (transition) | |||
| 15,632 | 15,632 | 1 | T→A | SNP (transversion) | |||
| 15,634 | 15,634 | 1 | G→A | SNP (transition) | |||
| 15,674 | 15,674 | 1 | T→C | SNP (transition) | |||
| 15,685 | 15,685 | 1 | G→A | SNP (transition) | |||
| 15,692 | 15,692 | 1 | C→T | SNP (transition) | |||
| 15,755 | 15,755 | 1 | C→T | SNP (transition) | |||
| 15,766 | 15,766 | 1 | C→T | SNP (transition) | |||
| 15,813 | 15,813 | 1 | G→A | SNP (transition) | |||
| 15,815 | 15,815 | 1 | A→G | SNP (transition) | |||
| 15,817 | > 15817 | > 1 | GT→A | Deletion | |||
| 15,907 | 15,907 | 1 | +A | Insertion | |||
| 16,376 | 16,439 | 64 | (ACACGTATACACGTATACACGTATACACGTAT)8→(ACACGTATACACGTATACACGTATACACGTAT)10 | Insertion (tandem repeat) | |||
| 16,504 | 16,504 | 1 | A→C | SNP (transversion) | |||
| 16,507 | 16,509 | 3 | +ACC | Insertion | |||
| 16,527 | 16,528 | 2 | GC→CG | Substitution | |||
| 16,689 | 16,689 | 1 | A→G | SNP (transition) |
CDS, coding sequence; SNP, single nucleotide polymorphism.