Table 6. Statistics for C. canadensis genome scaffolded assemblies CP2-3 and AB2-3 using FL- and PL-ORFs.
Assembly | Scaffolded Assembly | |
---|---|---|
PacBio-Canu assembly CP2-3 | ||
Number of contigs/scaffolds | 22,502 | 21,157 |
Longest contig/scaffold | 3,330,706 bp | 4,235,261 bp |
Span (total bp) | 2.486 Gb | 2.515 Gb |
Mean contig/scaffold length | 110,503 bp | 119,017 bp |
N50 contig/N50 scaffold | 278,680 bp | 317,558 bp |
Abyss assembly AB2-3 | ||
Number of contigs/scaffolds | 316,144 | 300,561 |
Longest contig/scaffold | 206,011 bp | 787,257 bp |
Span (total bp) | 2.431 Gb | 2.432 Gb |
Mean contig/scaffold length | 7,688 bp | 8,091 bp |
N50 contig/N50 scaffold | 17,517 bp | 19,662 bp |