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. Author manuscript; available in PMC: 2017 Feb 7.
Published in final edited form as: Mycol Prog. 2016 Sep;15(9):921–937. doi: 10.1007/s11557-016-1218-4

Table 1.

Isolates and accession numbers used in the phylogenetic analyses; those in bold were isolated/sequenced in the present study

Species Isolate No. Herbarium No.a Substrate/Host Country GenBank accession numbers
act1 ITS LSU rpb1 rpb2 tef1 tub2
N. asiatica MAFF 241439 BPI 879972 unid. dead bark Japan HM484505 HM484701 HM484563 JQ014140 HM484604
N. cinnabarina CBS 125165 BPI 879981 Aesculus sp. France HM484503 HM484548 HM484562 HM484577 JQ014125 HM484527 HM484606
N. dematiosa CBS 126570 BPI 749337 unid. dead bark USA HM484502a HM484557 HM484561 HM484576 JQ014144 HM484534 HM484603
N. nigrescens CBS 125148 BPI 871083 unid. dead twigs USA HM484618 HM484707 HM484720 HM484781 JQ014123 HM484672 HM484806
Septofusidium berolinense CBS 731.70 KM231250 KM231841 KM231722 KM232274 KM232417 KM231978 KM232112
S. herbarum CBS 265.58 Urtica dioica UK KM231251 KM231842 KM231723 KM232275 KM232418 KM231979 KM232113
Thyronectria aquifolii CBS 125027 WU 30360 Ilex aquifolium UK KJ570663 HM534891 HM534891 KJ570715 HM534881 HM534870 KJ570638
T. asturiensis CBS 136000 WU 32124 Quercus ilex Spain KJ570664 KJ570690 KJ570690 KJ570716 KJ570741 KJ570760 KJ570639
T. aurigera CBS 109874 BPI 841465 Fraxinus excelsior France HM484511 HM484551 HM484573 HM484586 HM484521 HM484600
T. austroamericana GG WU 32664 Gymnocladus dioicus Austria KJ570665 KJ570691 KJ570691 KJ570717 KJ570742 KJ570761 KJ570640
T. balsamea CBS 125137 NCSU Abies fraseri USA JF832454 JF832599 JF832729 JF832805 JQ014142 JF832561 JF832849
T. berolinensis CBS 127382 WU 30361 Ribes sanguineum Austria KJ570666 HM534893 HM534893 KJ570718 HM534883 HM534872 KJ570641
T. boothii CBS 128977 BPI 881052 Picea abies Slovakia JF832475 JF832617 JF832755 JF832796 JF832552 JF832871
T. caraganae TCA WU 35938 Caragana arborescens Ukraine KX514381 KX514384 KX514384 KX514389 KX514395 KX514398
T. caraganae TCA1 WU 35939 Caragana arborescens Ukraine KX514382 KX514385 KX514385 KX514390 KX514396 KX514399
T. caudata CBS 136003 WU 32130 Berberis cretica Greece KJ570667 KJ570692 KJ570692 KJ570719 KJ570743 KJ570762 KJ570642
T. chrysogramma TCH, CBS 141087 WU 35942 Ulmus americana Canada KX514383 KX514386 KX514386 KX514391 KX514392 KX514397 KX514400
T. concentrica CBS 121121 BPI 878442 Agave americana Italy HM484514 HM484547 HM484572 HM484587 KM232409 HM484524 HM484609
ALLA WU 35943 Agave americana Spain KX514387 KX514387
ALLM WU 35944 Agave americana Spain KX514388 KX514388 KX514393
T. coryli CBS 137264 WU 32129 Corylus avellana Austria KJ570669 KJ570693 KJ570693 KJ570721 KJ570744 KJ570763 KJ570644
T. cucurbitula CBS 259.58 Pinus sylvestris Netherlands GQ505974 HM484541 GQ505998 GQ506028 JQ014131 HM484530 HM484592
T. giennensis rotundifolia CBS 139474 AH 47011 Quercus ilex ssp. rotundifolia Spain KR057941 KR057943 KR057943 KR057945 KR057947 KR057949 KR057951
T. ilicicola CBS 125147 BPI 880698 Ilex aquifolium UK HM484506 HM484538 HM484565 HM484579 HM484522 HM484590
T. lamyi CBS 137263 WU 32159 Berberis vulgaris Austria KJ570672 KJ570695 KJ570695 KJ570723 KJ570746 KJ570765 KJ570647
T. miltina CBS 121121 BPI 878442 Agave americana Italy HM484514 HM484547 HM484572 HM484587 KM232409 HM484524 HM484609
T. obscura CBS 136923 WU 32142 Tamarix tetrandra Austria KJ570673 KJ570699 KJ570699 KJ570724 KJ570747 KJ570766
T. okinawensis CBS 129369, MAFF 241410 BPI 881058, TUA-TPP-h92 Castanopsis sp. Japan JF832451 JF832674 JF832751 JF832827 JF832585 JF832878
T. pinicola CBS 125166 BPI 881059 Pinus sylvestris Germany HM484508 HM484540 HM484567 HM484580 HM484528 HM484591
T. pistaciae CBS 139475 AH 45402 Pistacia lentiscus Spain KR057942 KR057944 KR057944 KR057946 KR057948 KR057950 KR057952
T. quercicola rotundifolia CBS 128976 BPI 871328 Quercus ilex ssp. rotundifolia Spain JF832450 JF832624 JF832743 JF832831 KM232411 JF832581 JF832880
T. rhodochlora CBS 136006 WU 31656 Acer campestre Austria KJ570678 KJ570704 KJ570704 KJ570729 KX514394 KJ570771 KJ570651
T. rosellinii CBS 129162 BPI 881066 Abies balsamea USA JF832474 JF832614 JF832739 JF832820 JF832578 JF832870
T. roseovirens CBS 135999 WU 32154 Laburnum alpinum Italy KJ570683 KJ570709 KJ570709 KJ570734 KJ570754 KJ570776 KJ570656
T. sinopica CBS 127386 WU 30364 Hedera helix Austria KJ570689 HM534900 HM534900 KJ570740 HM534890 HM534879 KJ570662
CBS 125107 NY Pinus strobus USA JF832467 JF832605 JF832725 JF832813 JF832569 JF832861
T. strobi
T. cf. virens NP10 WU 33426 Ostrya carpinifolia France KM225678 KM225684 KM225684 KM225689 KM225696 KM225701
T. yuccae CBS 125499 Yucca elata USA KM231247 KM231836 KM231717 KM232270 HQ897730 KM231974 KM232107
T. zangii HMAS 251258 HMAS 251258 Populus sp. China JX843456 JN997424 JX843458 JX843452 JX843454 JN997421
T. zanthoxyli CBS 129157 BPI 881069 unid. dead bark USA JF832510 JF832627 JF832753 JF832833 JF832590 JF832884
Tilachlidium brachiatum CBS 363.97 Agaricus sp. France KM231248 KM231838 KM231719 KM232271 KM232414 KM231975 KM232109
a

AH Universidad de Alcalá, Madrid, Spain, BPI U.S. National Fungus Collections USDA-ARS MD USA, CBS Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands, HMAS Institute of Microbiology, Chinese Academy of Sciences, Beijing, China, MAFF MAFF Genebank, National Institute of Agrobiological Sciences, Ibaraki, Japan, NCSU The Mycological Herbarium, North Carolina State University, NC, USA, NY The New York Botanical Garden, New York, USA, TUA-TPP-h Yuuri Hirooka, Tropical Plant Protection Lab Herbarium, Tokyo University of Agriculture, Tokyo, Japan, WU Herbarium of the University of Vienna, Austria