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. 2017 Feb 8;18:94. doi: 10.1186/s12859-017-1516-0

Table 2.

Simulated data: sensitivity analysis for varying values of the prior expected value of p pj, m, and the slab variance rpj2, and for two different scenarios, characterized by different values of the dispersion parameter ψ

m=0.005 m=0.01 m=0.05
rpj2=1 rpj2=10 rpj2=100 rpj2=1 rpj2=10 rpj2=100 rpj2=1 rpj2=10 rpj2=100
ψ=0.01
MCC 0.69 0.93 0.96 0.69 0.93 0.95 0.69 0.93 0.95
FPR 0.01 0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.00
FNR 0.02 0.04 0.08 0.02 0.05 0.09 0.02 0.05 0.08
Accuracy 0.99 1.00 1.00 0.99 1.00 1.00 0.99 1.00 1.00
AUC 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00
ψ=0.1
MCC 0.53 0.73 0.72 0.53 0.73 0.71 0.52 0.73 0.72
FPR 0.01 0.00 0.00 0.01 0.00 0.00 0.01 0.00 0.00
FNR 0.26 0.37 0.46 0.26 0.37 0.47 0.26 0.37 0.47
Accuracy 0.99 1.00 1.00 0.99 1.00 1.00 0.99 1.00 1.00
AUC 0.96 0.96 0.93 0.96 0.96 0.93 0.95 0.95 0.93

Values are averages over 30 replicates