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. Author manuscript; available in PMC: 2017 Feb 10.
Published in final edited form as: Sci Transl Med. 2016 Jul 27;8(349):349ra100. doi: 10.1126/scitranslmed.aaf5103

Fig. 3. Effects of maternal HIV infection on the infant microbiome.

Fig. 3

(A) Principle coordinates analysis of unweighted UniFrac distances based on mother’s HIV status at each infant sample site (mouth, skin, stool). (B) α-diversity (Shannon index) at each infant sample site based on mother’s HIV status. (C) Bacterial compositions across infant sample sites at the taxonomic level of family. (D) Heatmap representation of individual bacterial compositions at the family level. Families with an overall relative abundance of less than 0.5% are omitted for the sake of clarity. (E) List of all taxa at any family level or infant sample site that were significantly different based on mother’s HIV status using corrected p values (fdr_p values <0.1).