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. 2017 Feb 10;7:42252. doi: 10.1038/srep42252

Table 2. Metabolic features of the acI strains deduced from their genome sequences.

Strain (Tribe) IMCC25003 (acI-A1) IMCC26103 (acI-A4) IMCC19121 (acI-A7) IMCC26077 (acI-C1)
Photoheterotrophy Rhodopsin
Retinal biosynthesis × ×
Carbon metabolism EMP
ED (semi-phosphorylative) × × ×
PPP, oxidative × × ×
PPP, non-oxidative
TCA
Gluconeogenesis × ×
Formate dehydrogenase × × ×
α, β-Glucosidase/galactosidase × ×
Glycogen synthesis × ×
Vitamin and cofactor Thiamine × × × ×
Biotin × × × ×
Cobalamin × × × ×
Riboflavin ×
Niacin ×
Pantothenic acid
Pyridoxine
Folic acid
Molybdenum cofactor × × ×
ABC transporters Spermidine/Putrescine
Glycine betaine/Proline × × ×
Osmoprotectant × × ×
Sorbitol/Mannitol × × ×
α-Glucoside × ×
Raffinose/Stachyose/Melibiose ×
Galactose oligomer/Maltooligosaccharide × × ×
Glucose/Mannose × ×
Fructose × × ×
Ribose/D-Xylose × ×
D-Xylose ×
Branched-chain amino acid
Iron complex × ×
Cobalt × × ×
Inorganic nutrient utilization Phosphate transporter
Ammonium transporter
Assimilatory sulfate reduction × × × ×

EMP, the Embden-Meyerhof-Parnas pathway; ED, the Entner-Doudoroff pathway; PPP, pentose phosphate pathway; TCA, tricarboxylic acid cycle. Presence; × Absence.