Table 2. Metabolic features of the acI strains deduced from their genome sequences.
Strain (Tribe) | IMCC25003 (acI-A1) | IMCC26103 (acI-A4) | IMCC19121 (acI-A7) | IMCC26077 (acI-C1) | |
---|---|---|---|---|---|
Photoheterotrophy | Rhodopsin | • | • | • | • |
Retinal biosynthesis | • | • | × | × | |
Carbon metabolism | EMP | • | • | • | • |
ED (semi-phosphorylative) | × | × | × | • | |
PPP, oxidative | • | × | × | × | |
PPP, non-oxidative | • | • | • | • | |
TCA | • | • | • | • | |
Gluconeogenesis | × | × | • | • | |
Formate dehydrogenase | × | × | • | × | |
α, β-Glucosidase/galactosidase | × | • | × | • | |
Glycogen synthesis | • | × | • | × | |
Vitamin and cofactor | Thiamine | × | × | × | × |
Biotin | × | × | × | × | |
Cobalamin | × | × | × | × | |
Riboflavin | • | × | • | • | |
Niacin | • | • | × | • | |
Pantothenic acid | • | • | • | • | |
Pyridoxine | • | • | • | • | |
Folic acid | • | • | • | • | |
Molybdenum cofactor | × | × | • | × | |
ABC transporters | Spermidine/Putrescine | • | • | • | • |
Glycine betaine/Proline | × | × | • | × | |
Osmoprotectant | • | × | × | × | |
Sorbitol/Mannitol | • | × | × | × | |
α-Glucoside | • | × | • | × | |
Raffinose/Stachyose/Melibiose | × | • | • | • | |
Galactose oligomer/Maltooligosaccharide | × | × | • | × | |
Glucose/Mannose | × | • | × | • | |
Fructose | × | • | × | × | |
Ribose/D-Xylose | • | × | × | • | |
D-Xylose | • | • | • | × | |
Branched-chain amino acid | • | • | • | • | |
Iron complex | • | × | × | • | |
Cobalt | × | × | × | • | |
Inorganic nutrient utilization | Phosphate transporter | • | • | • | • |
Ammonium transporter | • | • | • | • | |
Assimilatory sulfate reduction | × | × | × | × |
EMP, the Embden-Meyerhof-Parnas pathway; ED, the Entner-Doudoroff pathway; PPP, pentose phosphate pathway; TCA, tricarboxylic acid cycle. • Presence; × Absence.