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. 2016 May 25;6(6):96. doi: 10.3390/nano6060096

Table 1.

Surface-enhanced Raman spectroscopy (SERS) wavenumbers (cm−1)* and tentative assignments of genomic DNAs extracted from different grapevine varieties (see text for details).

Feteasca Neagra Tamaioasa Romaneasca Gordan Feteasca Regala Coarna Neagra Ardeleanca Braghina Carloganca Francuse Cramposie Tentative Assignment a
360 m 359 w 356 vw 363 w 354 w 362 m 359 vw dG, dT, dA str
378 w 421 vw 410 w str dG, dT, dA
452 m 451 vw 448 w 449 w 456 w 448 m str deoxyribose
480 w 481 w str deoxyribose
525 m 528 w 526 w 517 vw 530 w dC/dT (ring def)
571 w 570 w 577 w dA (C2–H, N9–H wagging)
613 s 613 s 613 m 613 m 613 m deoxyribose (C3′-endo-anti)
660 w 657 w 663 w dG (ring breathing)
707 vw 706 w 706 w dA (ring breathing)
732 s 725 m 721 w 723 vw dA (ring breathing)
741 vw dT (ring breathing)
773 s 773 s 773 m 773 m 772 m 771 vw dC, C2′-endo-anti
795 m 796 m 790 w bk 5′C–O–P–O–C3′ sym str
829 w deoxyribose C2′-endo
928 w 929 w 913 w 911 m 915 m 907 w deoxyribose
958 w dA/dC/dG (NH2 rk)
1016 vw 988 vw 1008 w dT (out-of-plane NH2 wagging)
1029 vw 1055 vw 1031 w 1059 w dA (N- deoxyribose str)
1086 w 1087 w 1085 vw 1088 vw 1084 vw 1084 w 1084 w bk PO2 sym str
1127 m 1127 m 1129 m 1122 w 1136 vw 1126 m 1127 m 1127 m 1119 vw 1127 m dA (C8–N9 str, N9–H, C8–H def)
1182 s 1180 m 1175 m 1175 m 1176 s 1174 w 1170 m 1174 s 1172 m dA, dG (C5–C6 str)
1228 w 1230 w dT (in-plane ring - CH3 str)
1280 sh dC (C–NH2 str + ring str)
1311 s 1310 s 1308 m 1310 m 1308 s 1306 m 1304 m 1300 m 1305 m dA, dG (C–N str (Im))
1331 m dA, dG (ring mode)
1363 vs 1363 vs 1363 s 1363 vs 1383 w 1363 vs 1359 s 1361 m 1370 s 1362 m dT, dA, dG (C–N str (Py))
1421 w 1422 m 1425 w 1423 vw 1432 w 1434 vw Deoxyribose C2′H2 scissoring
1468 vw 1451 vw 1465 w 1450 w 1452 w Deoxyribose CH2
1510 vs 1510 vs 1510 vs 1509 vs 1510 vs 1508 m 1510 w 1512 w dA (NH2 def)
1545 vw 1534 m 1532 w dT (in-plane ring str)
1575 s 1574 s 1575 m 1574 m 1575 vw 1576 m 1575 m dG, dA (C2=N3 of guanine)
1601 sh 1621 w 1621 s 1602 s 1604 s 1621 s 1623 m dA, dG, dC (NH2 def)
1651 vs 1650 vs 1651 vs 1650 s 1650 s 1648 m dT, δ(H2O) (C=O str, C=C str)
1700 w dG (C–O), C–C

* Abbreviations: vs, very strong; s, strong; m, moderate; w, weak; vw, very weak; sh, shoulder. a Abbreviations: dA, deoxyadenosine; dG, deoxyguanosine; dC, deoxycytidine; dT, thymidine; bk, backbone; sym, symmetric; str, stretching; def, deformation; rk, rocking; Im, imidazole; Py, pyrimidine.