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. 2017 Jan;9(1):42–53. doi: 10.21037/jtd.2017.01.04

Table 6. The function and pathway enrichment of DEGs of black module and pink module.

ID Terms FDR Genes
Black module-biological process
   GO:0007586 Digestion 4.66E-05 SSTR1, BAAT, SCTR
   GO:0006811 Ion transport 0.00158761 KCNK17, SCN1A, CFTR, SLC5A9
   GO:0055085 Transmembrane transport 0.00176614 SCN1A, SLC46A2, CFTR, SLC5A9
   GO:0007165 Signal transduction 0.00987753 RASGRF1, NRGN, IGFALS, RRAD
Black module-cellular component
   GO:0005576 Extracellular region 3.96E-06 C16orf89, SCGB3A2, HP, SFTPD, FIGF, WFDC2, SCGB3A1, IGFAL
   GO:0005615 Extracellular space 3.72E-05 SFTPD, FIGF, WFDC2, SCGB3A1,IGFALS,BMP3
   GO:0005886 Plasma membrane 0.000342 RASGRF1, SSTR1, KCNK17, SCN1A, SCTR, SLC46A2, CLDN2, LRP2, RRAD
   GO:0016021 Integral to membrane 0.013611 KLHDC7A, KCNK17, SCN1A, SLC46A2, CLDN2, LRP2, CFTR, SLC5A9
   GO:0016020 Membrane 0.023071 KLHDC7A, KCNK17, SCN1A, FIGF, LRP2, CFTR, SLC5A
Black-KEGG pathway
   hsa04976 Bile secretion 1.91E-05 CFTR, SCTR, BAAT
Pink-biological process
   GO:0035085 Cilium axoneme 2.38E-06 TEKT3, DNAH6, TEKT2
   GO:0005929 Cilium 1.34E-06 SNTN, TEKT3, DNAH6, TEKT2
   GO:0005737 Cytoplasm 1.31E-05 TEKT3, DNAH6, TEKT2, DYNLRB2
   GO:0005856 Cytoskeleton 1.31E-05 TEKT3, DNAH6, TEKT2, DYNLRB2
   GO:0005874 Microtubule 1.31E-05 TEKT3, DNAH6, TEKT2, DYNLRB2

FDR, false discovery rate; DEG, differentially expressed genes.