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. 2017 Feb 13;7:42206. doi: 10.1038/srep42206

Table 1. Primers used for RT-qPCR analysis and dsRNA synthesis.

Gene Primer sequence (5′ to 3′) Amplicon size (bp) PCR efficiency (%) R2
RT-qPCR
ylsAct CATCCACGTAACCACCTACAA 224 105.4 0.999
AGGCCAAGATAGATCCACCA
ylsEF1α ACTACCCAGTGGTCCGAGTC 209 104.1 1.000
AAGGTCTTGCCAGTGGTCTT
ylsGADPH GCAAAGTCATTCCCGATCTT 196 103.6 0.996
GAGACGATTTCTTCATCGCA
ylsRPS11 ACGGAATCCCATTCAAAGAG 167 102.5 0.999
AGCTTGAGCAGCTACATTGG
ylsRPS15e AAGCCAAGCCTAACGAGAAG 234 99 0.997
GTGGAATGAAACGAGACGAA
ylsRPS15p AGCTCTGAGGTCCAGATTGC 193 103.5 1.000
TCAAGTGGGTCCATCTTTCA
ylsTub TTGATTGCTCAGGTCGTCTC 196 115.7 0.995
GGTCATCTCTTGGACGGAGT
ylsUBQ CTTTGACGGGAAAGACGATT 156 92.8 0.998
AATCGCTCAGAGTACGTCCA
NlylsSDH AATGCCTGCTCGTTGATAAC 185 N.A. N.A.
ATGTCTTGCCCTAAGGTGCT
ylsArg4 CGAGTTCGAGCAGATTGAAA 70 N.A. N.A.
GATGGCAAATATGCCTGTTG
EdePRTase CGAATCCAGACATGATCGAC 165 N.A. N.A.
AGCCGTCATCCAGTGATGTA
dsRNA synthesis
dsEdePRTase T7-AAGAATCTACCGATCGCCCT 532 N.A. N.A.
T7-GGGATCTAATCAAGACGGCA
dsylsArg4-1 T7-GACATACGCGGCAGCATT 430 N.A. N.A.
T7-CGAGGCAGTAGGAAAGAAGC
dsylsArg4-2 T7-TCACCGAGACCCTACAATG 307 N.A. N.A.
T7-TCCGACACCGTCTTGACA
dsGFP T7-CCTGAAGTTCATCTGCACCAC 355 N.A. N.A.
T7-TGATGCCGTTCTTCTGCTTGT

Note: T7 RNA polymerase promoter sequence (5′-TAATACGACTCACTATAGGG-3′). N.A., not applicable.