Table 1. Primers used for RT-qPCR analysis and dsRNA synthesis.
Gene | Primer sequence (5′ to 3′) | Amplicon size (bp) | PCR efficiency (%) | R2 |
---|---|---|---|---|
RT-qPCR | ||||
ylsAct | CATCCACGTAACCACCTACAA | 224 | 105.4 | 0.999 |
AGGCCAAGATAGATCCACCA | ||||
ylsEF1α | ACTACCCAGTGGTCCGAGTC | 209 | 104.1 | 1.000 |
AAGGTCTTGCCAGTGGTCTT | ||||
ylsGADPH | GCAAAGTCATTCCCGATCTT | 196 | 103.6 | 0.996 |
GAGACGATTTCTTCATCGCA | ||||
ylsRPS11 | ACGGAATCCCATTCAAAGAG | 167 | 102.5 | 0.999 |
AGCTTGAGCAGCTACATTGG | ||||
ylsRPS15e | AAGCCAAGCCTAACGAGAAG | 234 | 99 | 0.997 |
GTGGAATGAAACGAGACGAA | ||||
ylsRPS15p | AGCTCTGAGGTCCAGATTGC | 193 | 103.5 | 1.000 |
TCAAGTGGGTCCATCTTTCA | ||||
ylsTub | TTGATTGCTCAGGTCGTCTC | 196 | 115.7 | 0.995 |
GGTCATCTCTTGGACGGAGT | ||||
ylsUBQ | CTTTGACGGGAAAGACGATT | 156 | 92.8 | 0.998 |
AATCGCTCAGAGTACGTCCA | ||||
NlylsSDH | AATGCCTGCTCGTTGATAAC | 185 | N.A. | N.A. |
ATGTCTTGCCCTAAGGTGCT | ||||
ylsArg4 | CGAGTTCGAGCAGATTGAAA | 70 | N.A. | N.A. |
GATGGCAAATATGCCTGTTG | ||||
EdePRTase | CGAATCCAGACATGATCGAC | 165 | N.A. | N.A. |
AGCCGTCATCCAGTGATGTA | ||||
dsRNA synthesis | ||||
dsEdePRTase | T7-AAGAATCTACCGATCGCCCT | 532 | N.A. | N.A. |
T7-GGGATCTAATCAAGACGGCA | ||||
dsylsArg4-1 | T7-GACATACGCGGCAGCATT | 430 | N.A. | N.A. |
T7-CGAGGCAGTAGGAAAGAAGC | ||||
dsylsArg4-2 | T7-TCACCGAGACCCTACAATG | 307 | N.A. | N.A. |
T7-TCCGACACCGTCTTGACA | ||||
dsGFP | T7-CCTGAAGTTCATCTGCACCAC | 355 | N.A. | N.A. |
T7-TGATGCCGTTCTTCTGCTTGT |
Note: T7 RNA polymerase promoter sequence (5′-TAATACGACTCACTATAGGG-3′). N.A., not applicable.