Table 2. List of reference genes (RGs) and genes of interest (GOIs) analysed in Cymodocea nodosa.
Gene symbol | Protein name | Gene Ontology |
---|---|---|
Reference genes (RGs) | ||
18S | Ribosomal RNA 18S | Translation |
eIF4A | Eukaryotic initiation factor 4A | Translation/Protein biosynthesis |
GAPDH | Glyceraldehyde-3-phosphate dehydrogenase | Glycolysis |
UBI | Ubiquitin | Ubiquitin-dependent protein catabolic process |
Genes of interest (GOIs) | ||
psaJ | Photosystem I reaction center subunit IX | Photosynthesis |
psaC | Photosystem I iron-sulfur center | Photosynthesis |
psbA | Photosystem II protein D1 | Photosynthesis |
psbD | Photosystem II protein D2 | Photosynthesis |
LHCA1 | Photosystem I Light Harvesting Complex gene 1 | Photosynthesis |
FD | Ferredoxin, chloroplastic | Electron transport chain |
rbcL | RuBisCO large subunit | Carbon dioxide fixation |
ATPA | ATP synthase subunit alpha | ATP biosynthetic process |
PEPC | Phosphoenolpyruvate carboxylase | Carbon dioxide fixation |
SUS | Sucrose synthase | Sucrose metabolic process |
BCA | Beta carbonic anhydrase | Carbon utilization |
SOD | Copper/zinc superoxide dismutase | Response to oxidative stress |
CAT | Catalase | Response to oxidative stress |
APX7 | L-ascorbate peroxidase 7, chloroplastic | Response to oxidative stress |
APX6 | L-ascorbate peroxidase 6 | Response to oxidative stress |
LBP | Luminal binding protein | Response to oxidative stress |
GSH-S | Glutathione synthase | Glutathione biosynthetic process |
GR | Glutathione reductase | Glutathione metabolic process |
MTP | Metal tolerance protein | Ion transport |
MT | Metallothionein | Cellular metal ion homeostasis |
Gene names, gene encoding protein names and gene ontology are given.