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. 2017 Feb 13;12(2):e0171933. doi: 10.1371/journal.pone.0171933

Table 2. The EST based SSR markers identified and developed.

Primer Name Sequence Repeat motif Expected product size Gene from which marker developed GenBank Accession number Length of nucleotides Annealing temperature
EG01F 5′TGCCTTGTCTCTCCAGAAAACT3′ (AAAG)3 384 Arabidopsis thaliana chromosome 4 22 60.415
EG01R 5′CACTGATGCACATGAAACTGAA3′ 22 59.764
EG02F 5′TCTCTTCTCGAAACTAAGCATGG3′ (CTT)4 397 do 23 60.028
EG02R 5′CATCCCGTGTACTATCTCCCTC3′ 22 59.848
EG03F 5′CCCGAGAAAGTTGGATACAGAA3′ (T)10 279 do 22 60.474
EG03R 5′AACGTCACTTGTCGATTTGTTG3′ 22 60.074
EG04F 5′TGAAATCGAAAACGCGCAGA3′ Arabidopsis thaliana agamous-like MADS-box protein AGL11 mRNA NM_117064.6 20 59
EG04R 5′CCAGATCCAGAACCAGCAGT3′ 20 59
EG05F 5′GTGTCCGATCCAAGAAGCAC3′ Arabidopsis thaliana agamous-like MADS-box protein AGL5 mRNA NM_180046.2 20 60
EG05R 5′CCCGACTGGTGAGAAGAAGT3′ 20 60
EG06F 5′CAATGGAGGAAGGTGGGAGT3′ Arabidopsis thaliana agamous-like MADS-box protein AGL1 mRNA NM_115740.2 20 59
EG06R 5′CGGCATCACACAAGACAGAG3′ 20 59
EG07F 5′GGAATTTGCGGTGTTGGACT3′ Elaeis guineensis MADS-box transcription factor 21-like (LOC105034563), mRNA XM_010909778.1 20 59
EG07R 5′GGCAACCTCAGCATCACAAA3′ 20 59
EG08F 5′GGAATTTGCGGTGTTGGACT3′ do do 20 59
EG08R 5′TATCTGGTGGCGCAACTTTG3′ 20 59