Table 2.
Locus | Sequence 5′–3′ | PCR | Repeat | A | Size bp | H o | H s | H t |
---|---|---|---|---|---|---|---|---|
EP1 | F: TGG TGC CTC ATG TGT TCC G | 57° | ACAT | 18 | 146–218 | 0.686 | 0.665 | 0.838 |
R: GTG GCG GAT GGA AGC AAA G | ||||||||
EP7 | F: TCC AGG TTG GCT TGG ATG G | 57° | ATGT | 11 | 244–285 | 0.389 | 0.428 | 0.705 |
R: AGA ACA GGC CAC AAC AGA G | ||||||||
EP8 | F: TCT TTC TAA GAT TAT GGA ACG CC | 57° | TGAA | 9 | 168–204 | 0.44 | 0.536 | 0.692 |
R: TTC GCA GTC CCA GAT AGC C | ||||||||
EP16 | F: GCT ATG TAT CTG TGC GTG C | 57° | AAAT | 10 | 164–208 | 0.369 | 0.405 | 0.438 |
R: GGT TTC ACT GCC CGC TTA C | ||||||||
EP21 | F: GCA CTC CAC TGC CTT TTG G | Multi 58° | ACAT | 12 | 164–215 | 0.574 | 0.785 | 0.87 |
R: TAT GAA TTG CCC AGT GCC | ||||||||
EP29 | F: ACG AAT CGG CAG TGT CCA G | 59° Mg 3.0 | AAT | 14 | 180–231 | 0.402 | 0.513 | 0.758 |
R: AGC TTG TGT CAG TCT GGT TTG | ||||||||
EP31 | F: ACT GGA AAA AGC TAA TTG ATA GAT G | 57° | AGAT | 31 | 159–299 | 0.596 | 0.859 | 0.924 |
R: TTG CTT ATG TAA ATT GGA AAT GTT | ||||||||
EP33 | F: GTG CAC CCA GTC AAT CAC AC | 59° Mg 2.5 | AATC | 12 | 187–223 | 0.662 | 0.726 | 0.778 |
R: ACT GAA TCG CAG ACC CAG |
PCR, primer‐specific PCR conditions including annealing temperature; multi, Qiagen Multiplex mastermix (all others in Qiagen HotStarTaqPlus mastermix); Mg, final concentration of MgCl2 (mmol/L) if supplemented. F, forward; R, reverse.A, total number of alleles in 168 individuals from 13 sampling locations; size: range of allele sizes; bp, base pairs. Nei's diversity statistics (Nei, 1973) were calculated in FSTAT jackknifed across populations, using nine populations comprising 14–32 individuals, H o, observed heterozygosity; H s, expected heterozygosity under HWE within subpopulations; H t, expected heterozygosity in total population.