Table 2.
Gene locus | SNP | Chromosome | Location | Position | Genotype | n | % | MAF |
---|---|---|---|---|---|---|---|---|
CYP19A1 | rs727479 | 15 | Intron 1 | 49 321 839 | AA | 40 | 36.36 | 0.364 |
AC | 60 | 54.55 | ||||||
CC | 10 | 9.09 | ||||||
CYP19A1 | rs1008805 | 15 | Exon 1 | 49 336 891 | AA | 27 | 24.55 | 0.473 |
AG | 62 | 56.36 | ||||||
GG | 21 | 19.09 | ||||||
CYP19A1 | rs749292 | 15 | Exon 1 | 49 346 023 | AA | 16 | 14.55 | 0.600 |
AG | 56 | 50.91 | ||||||
GG | 38 | 34.55 | ||||||
CYP19A1 | rs730154 | 15 | Exon 1 | 49 378 496 | CC | 31 | 28.18 | 0.368 |
CT | 77 | 70.00 | ||||||
TT | 2 | 1.82 | ||||||
near TCL1A | rs7158782* | 14 | Intronic | 95 238 884 | AA | 85 | 77.27 | 0.118 |
AG | 24 | 21.82 | ||||||
GG | 1 | 0.91 | ||||||
near TCL1A | rs7159713 | 14 | Intronic | 95 239 330 | AA | 84 | 76.36 | 0.123 |
AG | 25 | 22.73 | ||||||
GG | 1 | 0.91 | ||||||
near TCL1A | rs2369049 | 14 | Intronic | 95 241 604 | AA | 85 | 77.27 | 0.118 |
AG | 24 | 21.82 | ||||||
GG | 1 | 0.91 | ||||||
near TCL1A | rs11849538 | 14 | Intronic | 95 245 031 | CC | 89 | 80.91 | 0.100 |
CG | 20 | 18.18 | ||||||
GG | 1 | 0.91 | ||||||
ABCB1 | rs1128503 (C1236T) | 7 | Exon 12 | 87 550 285 | CC | 25 | 22.73 | 0.495 |
CT | 61 | 55.45 | ||||||
TT | 24 | 21.82 | ||||||
ABCB1 | rs2032582 (G2677 T) | 7 | Exon 21 | 87 531 302 | GG | 35 | 31.82 | 0.450 |
GT | 51 | 46.36 | ||||||
TT | 24 | 21.82 | ||||||
ABCB1 | rs1045642 (C3435T) | 7 | Exon 26 | 87 509 329 | CC | 48 | 43.64 | 0.386 |
CT | 39 | 35.45 | ||||||
TT | 23 | 20.91 |
In full linkage disequilibrium with rs2369049; MAF, minor allele frequency; SNP, single‐nucleotide polymorphism