Table 5.
QTLs for seed mineral contents in the RILs across the two locations
| QTL a | Location | LG | Closest marker | Position | LOD | R2 b | CI c | Parent allele d |
|---|---|---|---|---|---|---|---|---|
| B-Ps1.1 | Whitlow | I | TP40441 | 138.3 | 7.3 | 15.1% | 128.9–148.4 | Kiflica |
| Spillman | I | TP50388 | 145.3 | 6.7 | 13.7% | 130.6–151.5 | Kiflica | |
| B-Ps6.1 | Spillman | VI | TP44490 | 120.0 | 4.7 | 10.3% | 113.8–131.6 | Kiflica |
| B-Ps7.1 | Whitlow | VII | TP65523 | 81.6 | 4.5 | 11.3% | 74.6–93.5 | Aragorn |
| Spillman | VII | TP40383 | 90.5 | 5.0 | 9.7% | 78.6–95.5 | Aragorn | |
| Ca-Ps4.1 | Whitlow | IV | TP47685 | 5.4 | 5.8 | 6.5% | 0.0–13.9 | Aragorn |
| Spillman | IV | TP47685 | 5.4 | 4.7 | 5.8% | 0.0–10.0 | Aragorn | |
| Ca-Ps5.1 | Whitlow | V | TP27214 | 53.4 | 9.9 | 12.7% | 43.3–57.7 | Kiflica |
| Spillman | V | TP27214 | 53.4 | 7.0 | 9.8% | 44.3–56.1 | Kiflica | |
| Ca-Ps7.1 | Whitlow | VII | TP4961 | 54.6 | 3.8 | 4.2% | 51.2–54.6 | Aragorn |
| Spillman | VII | TP4961 | 54.6 | 4.8 | 6.0% | 46.0–67.5 | Aragorn | |
| Ca-Ps7.2 | Whitlow | VII | AB122_VII | 151.3 | 17.2 | 23.1% | 141.4–161.0 | Aragorn |
| Spillman | VII | TP5669 | 151.9 | 14.2 | 20.3% | 141.4–161.0 | Aragorn | |
| Fe-Ps2.1 | Spillman | II | TP68770 | 43.5 | 5.9 | 11.9% | 33.3–55.1 | Aragorn |
| Fe-Ps2.2 | Whitlow | II | TP51928 | 89.9 | 6.0 | 12.3% | 79.0–98.2 | Aragorn |
| Fe-Ps3.1 | Whitlow | III | TP75231 | 135.2 | 5.2 | 10.7% | 124.2–145.9 | Aragorn |
| Fe-Ps5.1 | Spillman | V | TP75570 | 32.5 | 4.0 | 7.9% | 27.3–41.5 | Aragorn |
| Fe-Ps6.1 | Whitlow | VI | TP3330 | 95.4 | 5.2 | 10.5% | 87.6–99.7 | Kiflica |
| Spillman | VI | TP36434 | 91.6 | 5.3 | 10.6% | 86.6–101.6 | Kiflica | |
| K-Ps3.1 | Whitlow | III | agpl1_SNP2_III | 2.4 | 3.5 | 7.4% | 1.7–8.4 | Aragorn |
| K-Ps5.1 | Spillman | V | TP8763 | 126.9 | 4.2 | 9.5% | 122.9–130.4 | Aragorn |
| K-Ps6.1 | Whitlow | VI | TP3330 | 95.4 | 3.1 | 6.7% | 95.4 | Kiflica |
| K-Ps6.2 | Spillman | VI | TP25320 | 113.2 | 3.3 | 6.9% | 111.2–114.8 | Kiflica |
| Mg-Ps3.1 | Whitlow | III | TP73169 | 136.6 | 3.8 | 7.7% | 132.2–145.9 | Aragorn |
| Mg-Ps6.1 | Whitlow | VI | TP3330 | 95.4 | 7.5 | 15.9% | 82.7–107.9 | Kiflica |
| Mg-Ps6.2 | Spillman | VI | TP25320 | 112.2 | 5.9 | 13.6% | 101.9–123.8 | Kiflica |
| Mg-Ps7.1 | Whitlow | VII | TP65523 | 79.6 | 4.2 | 11.0% | 74.6–94.5 | Aragorn |
| Spillman | VII | TP66383 | 93.5 | 7.4 | 17.7% | 76.6–99.9 | Aragorn | |
| Mn-Ps5.1 | Whitlow | V | TP31866 | 190.0 | 3.4 | 6.2% | 188.7–190.0 | Kiflica |
| Spillman | V | TP39246 | 188.7 | 4.2 | 9.1% | 183.4–190.0 | Kiflica | |
| Mn-Ps6.1 | Whitlow | VI | TP45228 | 95.7 | 4.6 | 8.5% | 87.6–98.7 | Kiflica |
| Mn-Ps7.1 | Whitlow | VII | TP73423 | 162.9 | 9.6 | 19.8% | 154.3–173.8 | Aragorn |
| Spillman | VII | TP15320 | 167.3 | 4.0 | 8.6% | 162.9–168.3 | Aragorn | |
| Mo-Ps5.1 | Whitlow | V | TP42330 | 41.2 | 9.7 | 21.7% | 31.1–52.4 | Kiflica |
| Spillman | V | TP35621 | 39.7 | 11.4 | 24.6% | 29.6–52.4 | Kiflica | |
| P-Ps3.1 | Whitlow | III | TP75231 | 125.2 | 6.7 | 20.5% | 110.0–135.2 | Aragorn |
| P-Ps5.1 | Spillman | V | TP75570 | 32.5 | 3.5 | 6.5% | 32.5–35.1 | Aragorn |
| P-Ps6.1 | Spillman | VI | TP43599 | 71.5 | 3.3 | 6.4% | 70.9–72.5 | Aragorn |
| P-Ps6.2 | Whitlow | VI | TP3330 | 95.4 | 3.6 | 7.7% | 95.0–95.7 | Kiflica |
| Spillman | VI | TP46134 | 89.6 | 4.9 | 10.5% | 85.9–97.7 | Kiflica | |
| P-Ps7.1 | Whitlow | VII | TP60315 | 45.0 | 3.5 | 7.5% | 43.6–45.0 | Kiflica |
| P-Ps7.2 | Whitlow | VII | TP66383 | 92.5 | 5.6 | 13.1% | 78.6–98.9 | Aragorn |
| Spillman | VII | TP40383 | 90.5 | 10.0 | 21.0% | 77.6–99.9 | Aragorn | |
| S-Ps3.1 | Spillman | III | TP48073 | 152.7 | 3.3 | 6.9% | 152.7 | Aragorn |
| S-Ps6.1 | Whitlow | VI | TP45228 | 95.7 | 6.3 | 14.1% | 81.7–99.7 | Kiflica |
| Spillman | VI | TP45228 | 95.7 | 4.4 | 9.0% | 87.6–104.9 | Kiflica | |
| S-Ps7.1 | Spillman | VII | TP40383 | 90.5 | 3.5 | 7.3% | 87.7–91.5 | Aragorn |
| Zn-Ps2.1 | Whitlow | II | TP51928 | 88.9 | 3.9 | 8.1% | 84.6–91.5 | Aragorn |
| Zn-Ps3.1 | Spillman | III | TP30941 | 102.4 | 4.2 | 8.9% | 92.4–104.8 | Kiflica |
| Zn-Ps3.2 | Whitlow | III | TP5158 | 138.9 | 6.2 | 13.7% | 121.2–145.9 | Aragorn |
| Zn-Ps5.1 | Spillman | V | TP60024 | 38.0 | 3.4 | 7.1% | 37.5–38.0 | Aragorn |
aQTL names represent the traits, the initial of Pisum sativum, linkage group # and order of the QTLs
bR2 is percentage of phenotypic variance explained by the QTLs
cCI represents 95% confidence interval for the QTL location
dParental allele contributing to the trait