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. 2017 Feb 14;4:170011. doi: 10.1038/sdata.2017.11

Table 3. SNPs genotyped per chromosome on Illumina HumanOmniZhongHua Beadchip.

Chromosome All Array SNPs No Calls Not Polymorphic Used For Comparison
This table shows in the first two columns the chromosome and the number of SNPs on each chromosome on the Illumina HumanOmniZhongHua Beadchip. In the next three columns are the numbers of SNPs with no calls in any of the 72 samples, that are not polymorphic in the 72 samples, and that were polymorphic and genotypes at which were used for comparison with genotypes hard-called from imputed genotype probabilities and imputed alternative allele dosages.        
chr1 69485 5 3199 66126
chr2 70071 3 2958 66928
chr3 60192 7 2608 57516
chr4 53419 1 2478 50807
chr5 52477 1 2142 50307
chr6 62652 15 2555 59930
chr7 47158 4 1909 45157
chr8 45906 0 1824 44062
chr9 40597 0 1521 38996
chr10 46134 1 1971 44131
chr11 42894 1 1971 40888
chr12 42849 3 1822 40950
chr13 32399 1 1451 30931
chr14 28777 1 1167 27594
chr15 27769 3 1099 26647
chr16 29448 3 1276 28146
chr17 25411 1 1145 24252
chr18 27117 1 1104 26003
chr19 18919 4 956 17942
chr20 21918 2 843 21057
chr21 12613 1 500 12103
chr22 14056 1 480 13538
chrX 23362 1 869 21121
chrY 2041 1208 833 0
chrM 151 0 151 0
chrXY 307 307 0 0
Total 898122 1575 38832 855132