KEY RESOURCES TABLE
REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Goat polyclonal anti-mCherry | SICGEN | Cat# AB0040-200; RRID:AB_2333092 |
Goat polyclonal anti-GFP | SICGEN | Cat# AB0020-200; RRID:AB_2333099 |
Chicken polyclonal anti-GFP | Aves Labs | Cat# GFP-1020; RRID:AB_10000240 |
Rabbit polyclonal anti-GFAP | Dako | Cat# Z0334; RRID:AB_10013382 |
Rabbit polyclonal anti-GFP (for immuno-EM) | Frontier Institute | Cat# GFP-Rb-Af2020; RRID:AB_2571573 |
Donkey anti-Goat IgG (H+L), Alexa Fluor 488 | Thermo Fisher Scientific | Cat# A-11055; RRID:AB_2534102 |
Donkey anti-Goat IgG (H+L), Alexa Fluor 546 | Thermo Fisher Scientific | Cat# A11056; RRID:AB_10584485 |
Donkey anti-Rabbit IgG (H+L), DyLight 650 | Thermo Fisher Scientific | Cat# SA5-10049; RRID:AB_2556629 |
Donkey anti-Chicken IgY (IgG) (H+L), Cy2 | Jackson ImmunoResearch Labs | Cat# 703-225-155; RRID:AB_2340370 |
Goat anti-Rabbit Fab′ fragment IgG, NANOGOLD (for immuno-EM) | Thermo Fisher Scientific | Cat# N24916; RRID:AB_10104359 |
Experimental Models: Mouse lines | ||
Tg(Slc1a3-cre/ERT)1Nat/J | Dr. Jeremy Nathans, Johns Hopkins | RRID:IMSR_JAX:012586 |
B6.Cg-Tg(GFAP-cre/ERT2)505Fmv/J | Jackson Laboratory | RRID:IMSR_JAX:012849 |
Itpr2tm1Chen/Itpr2+ | Dr. Ju Chen, UC San Diego | RRID:MGI:3713675 |
B6SJL-Tg(SOD1*G93A)1Gur/J | Jackson Laboratory | RRID:IMSR_JAX:002726 |
B6;129-Gt(ROSA)26Sor(CAG-mGCaMP3) | This paper | N/A |
B6;129-Gt(ROSA)26Sortm4(CAG-GFP*)Nat/J | This paper | RRID:IMSR_JAX:021429 |
B6;129S6-Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/J | Jackson Laboratory | RRID:IMSR_JAX:007908 |
Chemicals (Pharmacological compounds) | ||
(S)-3,5-Dihydroxyphenylglycine, DHPG | Tocris | Cat# 0805; CAS:162870-29-3 |
Adenosine 5′-triphosphate magnesium salt | Sigma-Aldrich | Cat# A9187; CAS:74804-12-9 |
Bafilomycin A1 | Enzo | Cat# BML-CM110-0100; CAS: 88899-55-2 |
Benzamil | Tocris | Cat# 3380; CAS:161804-20-2 |
Cadmium chloride | Sigma-Aldrich | Cat# 202908; CAS:10108-64-2 |
Carbonyl cyanide 4 (trifluoromethoxy)phenylhydrazone (FCCP) | Tocris | Cat# 0453; CAS:370-86-5 |
Carboxyatractyloside potassium salt | Calbiochem | Cat# 216201; CAS:35988-42-2 |
CGP 37157 | Abcam | Cat# ab120012; CAS:75450-34-9 |
Cyclosporin A | Tocris | Cat# 1101, CAS:59865-13-3 |
Dantrolene, sodium salt | Tocris | Cat# 0507; CAS:14663-23-1 |
DL-TBOA | Tocris | Cat# 1223; CAS:205309-81-5 |
GSK-7975A | GlaxoSmithKline | N/A; CAS:1253186-56-9 |
HC 030031 | Tocris | Cat# 2896; CAS:349085-38-7 |
KB-R7943 mesylate | Tocris | Cat# 1244; CAS:182004-65-5 |
L-(−)-Norepinephrine (+)-bitartrate salt monohydrate | Sigma-Aldrich | Cat# A9512; CAS:108341-18-0 |
Picrotoxin | Sigma-Aldrich | Cat# P1675; CAS:124-87-8 |
Rotenone | Tocris | Cat# 3616; CAS:83-79-4 |
Tetrodotoxin citrate | Abcam | Cat# ab120055; CAS:18660-81-6 |
Tamoxifen | Sigma-Aldrich | Cat# T5648; CAS:10540-29-1 |
Thapsigargin | Sigma-Aldrich | Cat# T9033; CAS:67526-95-8 |
Veratridine | Tocris | Cat# 2918; CAS:71-62-5 |
Critical Commercial Assays | ||
Neural Tissue Dissociation Kit (P) | Miltenyi Biotec | Cat# 130-092-628 |
Recombinant DNA | ||
AAV8-hGFAP-mCherry-2A-Δ9UCP1-WPRE | This paper | N/A |
Sequence-Based Reagents | ||
Primer: tcaatgggcgggggtcgtt (CMV-E-as) | (Paukert et al., 2014) | N/A |
Primer: ctctgctgcctcctggcttct (ROSA26-s) | (Paukert et al., 2014) | N/A |
Primer: cgaggcggatcacaagcaata (ROSA26-as) | (Paukert et al., 2014) | N/A |
Primer: cacgtgatgacaaaccttgg (CaM-s) | This paper | N/A |
Primer: ggcattaaagcagcgtatcc (WPRE-as) | This paper | N/A |
Software and Algorithms | ||
ZEN Blue/Black | Zeiss | RRID:SCR_013672 |
ImageJ | https://imagej.nih.gov/ij/ | RRID:SCR_003070 |
Fiji | http://fiji.sc | RRID:SCR_002285 |
TurboReg | http://bigwww.epfl.ch/thevenaz/turboreg/ | RRID:SCR_014308 |
MATLAB (R2014b) | MathWorks | RRID:SCR_001622 |
LIBSVM | http://www.csie.ntu.edu.tw/~cjlin/libsvm/ | RRID:SCR_010243 |
pClamp 9.2 | Molecular Devices | RRID:SCR_011323 |
MiniAnalysis | Synaptosoft Inc. | RRID:SCR_014441 |
Origin 8.0 | OriginLab Corp. | RRID:SCR_014212 |
Prism 5.0 | GraphPad Software | RRID:SCR_002798 |
Adobe Illustrator CS6 | Adobe | RRID:SCR_014198 |
CaSCaDe | This paper | (see Data S1) |