TABLE 2 .
Reaction ID | Applied constraint (mM) |
---|---|
Ex_hco3_e | LBb and UB,c −1.57 for low HCO3, −3.14 for high HCO3 |
Ex_no3_e | LB and UB, −0.535 |
Ex_biotin_e | LB, −1,000; UB, 0 |
Ex_fe2_e | LB, −1,000; UB, 0 |
Ex_h_e | LB, −1,000; UB, 1,000 |
Ex_h2o_e | LB, −1,000; UB, 1,000 |
Ex_o2_e | LB, −1,000; UB, 1,000 |
Ex_pi_e | LB, −0.22; UB, 0 |
Ex_na1_e | LB, −1,000; UB, 1,000 |
Ex_so4_e | LB, −28.8; UB, 0 |
Ex_mg2_e | LB, −1,000; UB, 0 |
Ex_cl_e | LB, −1,000; UB, 1,000 |
Ex_thm_e | LB, −1,000; UB, 0 |
Constraints were applied to nutrient uptake and product secretion for sampling and simulations as used in reference 6, except for HCO3 instead of CO2 uptake. Exchange reactions not shown here are blocked.
LB, lower bound.
UB, upper bound.