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. 2017 Feb 14;2(1):e00142-16. doi: 10.1128/mSystems.00142-16

TABLE 2 .

Constraints applied to the metabolic network of P. tricornutuma

Reaction ID Applied constraint (mM)
Ex_hco3_e LBb and UB,c −1.57 for low HCO3, −3.14 for high HCO3
Ex_no3_e LB and UB, −0.535
Ex_biotin_e LB, −1,000; UB, 0
Ex_fe2_e LB, −1,000; UB, 0
Ex_h_e LB, −1,000; UB, 1,000
Ex_h2o_e LB, −1,000; UB, 1,000
Ex_o2_e LB, −1,000; UB, 1,000
Ex_pi_e LB, −0.22; UB, 0
Ex_na1_e LB, −1,000; UB, 1,000
Ex_so4_e LB, −28.8; UB, 0
Ex_mg2_e LB, −1,000; UB, 0
Ex_cl_e LB, −1,000; UB, 1,000
Ex_thm_e LB, −1,000; UB, 0
a

Constraints were applied to nutrient uptake and product secretion for sampling and simulations as used in reference 6, except for HCO3 instead of CO2 uptake. Exchange reactions not shown here are blocked.

b

LB, lower bound.

c

UB, upper bound.