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. 2017 Feb 14;5(3):e13133. doi: 10.14814/phy2.13133

Table 1.

Summary of California mice hypothalamic RNA‐seq data generated and aligned to the reference genome sequence

Sample type Sample Raw reads QC Mapped reads Mapping efficiency
Control ♀ 1 69,130,197 55,971,358 51,865,339 92.7
2 59,953,540 46,892,283 43,166,939 92.1
3 63,537,487 49,756,404 46,269,276 93
4 56,255,792 43,270,695 40,186,046 92.9
5 70,576,520 54,790,689 50,805,216 92.7
Control ♂ 1 46,376,849 34,835,622 33,238,813 95.4
2 65,673,113 51,651,522 47,823,627 92.6
3 52,258,679 42,073,456 38,938,021 92.6
4 59,220,633 47,041,870 43,660,840 92.8
5 39,935,256 31,793,528 29,287,635 92.1
BPA ♀ 1 45,592,976 36,777,665 33,894,109 92.2
2 62,081,241 48,332,836 44,626,692 92.3
3 48,640,791 37,908,444 34,912,852 92.1
4 64,901,425 49,432,382 45,486,404 92
5 71,890,086 56,217,073 51,563,272 91.7
BPA ♂ 1 66,308,474 49,724,724 45,792,562 92.1
2 56,296,984 44,408,114 40,927,183 92.2
3 62,267,149 49,653,807 45,765,399 92.2
4 68,054,969 53,980,003 50,117,318 92.8
5 80,868,525 63,580,564 58,320,110 91.7
EE ♀ 1 55,370,002 43,910,820 40,531,812 92.3
2 65,056,368 50,734,415 46,898,849 92.4
3 56,097,553 42,583,645 39,390,432 92.5
4 54,602,416 42,752,931 39,532,155 92.5
EE ♂ 1 60,772,693 48,331,755 44,729,572 92.6
2 51,359,489 40,459,368 37,291,216 92.2
3 65,978,847 52,139,890 48,467,572 93