Table 1.
H. avenae transcriptome sequencing | This papera | Kumar et al. [20]b | |||
---|---|---|---|---|---|
Method | Roche FLX+ | Illumina GAIIx | |||
Sample life stages | Pre-parasitic | Post-parasitic | Whole life stages (pre- and post-) | Hatched Juvenile 2 | Feeding female |
Num. of reads/PE-reads | 551,935 | 514,784 | 1,066,719 | 46,114,413 | 37,125,131 |
Total length (Mb) | 272 | 249 | 521 | 8795 | 7081 |
Average read length (bp) | 492 | 483 | 488 | 2×100 | 2×100 |
a This paper sequenced two mixed-stages transcriptomes of a population of H. avenae in China. The pre-parasitic mixed-stages included egg, juvenile 1 and hatched juvenile 2, while the post-parasitic mixed-stages included parasitic juvenile 2, juvenile 3, juvenile 4, adult female and male. The whole life stages data consisted of sequencing reads from both pre-parasitic and post-parasitic mixed-stages
b Kumar et al. [20] presented original transcriptomes sequencing for two life stages of a population of H. avenae in India