Table 2.
Assembly of H. avenae transcriptomes from two independent studies
| H. avenae transcriptome assembled | This paper | Kumar et al. [20] |
|---|---|---|
| Num. of total reads | 1,066,481 | 144,868,609 |
| Num. of aligned reads | 933,304 | 78,113,600 |
| Num. of contigs | 10,811 | 27,765 |
| Length range of contigs (bp) | 51–13,668 | 101–9075 |
| Mean length of contigs (bp) | 1442 | 682 |
| N50 of contigs (bp) | 1754 | 1028 |
| Num. of singletonsa | 71,401 | – |
| Length range of singletons (bp) | 50–1248 | – |
| Average length of singletons (bp) | 430 | – |
| Total transcripts length (Mb) | 19.31 | 18.93 |
a Singletons represent the reads that cannot be assembled in contigs