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. 2017 Feb 15;12(2):e0170534. doi: 10.1371/journal.pone.0170534

Table 3. The 12 microsatellite markers used in the present study.

Microsatellite marker Forward (F) and reverse (R) primer sequence (5’-3’) Primer concentration (μM) Allele frequency differential (δ)
Panel 1
D15 F: [VIC] 5’–GCTCTCTGAAGAGGCCCTG– 3’ R: 5’–ATTCCAAGAGTGACAGCATCC– 3’ 0.200.20 0.62
EF15-Mluc F: [PET] 5’–GATCGCAGTCCCTTCC– 3’ R: 5’–GCTTATGGGGAGAAATGAG– 3’ 0.270.27 -
F19 F: [VIC] 5’–GCTAGCCATGGAGAAGGAAG– 3’ R: 5’–CCCAAATCTGTCTTTCAGGC– 3’ 0.200.20 0.50
G2-Mluc F: [FAM] 5’–TGAAAAGAACTGGAGAGGCTTT– 3’ R: 5’–AGATTGATGAATGTGAAAGGTCAG– 3’ 0.200.20 0.71
G6-Mluc F: [PET] 5’–GGCTTTTTGAAAAGACTGAGG– 3’ R: 5’–ACATCAGCCAGTTCCTGTTC– 3’ 0.200.20 0.25
G31-Mluc F: [FAM] 5’–GATCACCAATCATGTAAGGTTCAC– 3’ R: 5’–AAGTCAAGGCCAAGCAAGTC– 3’ 0.200.20 0.68
Panel 2
B8-Mluc F: [VIC] 5’–AAATACCTGAGTGAGAACATTTAGTGGAG– 3’ R: 5’–CTCATTAACTTCATTGGTAAGTGTTGTACC– 3’ 0.400.40 0.50
C113 F: [FAM] 5’- ACCTCCCTGCCCTGCAC– 3’ R: 5’–GCAATGCTTCCTCCAAGTCC– 3’ 0.200.20 0.79
D15-Mluc F: [NED] 5’–AAATTCTTTCCCTCCAAAGTGG– 3’ R: 5’–GCACGCTCAGACTCCTTCC– 3’ 0.200.20 0.66
F19-Mluc F: [PET] 5’–TGTAGCTAGCCATGGAGAAGG– 3’ R: 5’–AAATGGTTACATTACAGAAAATGCTC– 3’ 0.200.20 0.59
G30-Mluc F: [PET] 5’–GGCATGAACATGGAGTGAGG– 3’ R: 5’–GCTAGAAGTTATGGTCAATGTTCCTG– 3’ 0.200.20 0.71
H23-Mluc F: [VIC] 5’–TTGTCTACTAGCATTTGTCCAGTG– 3’ R: 5’–ATAGCTATGTTGCCTAACCTATTTACTC– 3’ 0.400.40 0.43

The table provides the primers used in a specific multiplex PCR. The letters in square brackets indicate the fluoro-dyes used in one of the two sequences of each primer pair.