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. 2017 Feb 15;3(2):e1602373. doi: 10.1126/sciadv.1602373

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Copyright © 2017, The Authors

This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license, which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.

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Fig. 3 — (A) Genetic differentiation versus expected heterozygosity of all SNPs genotyped for A. fragilis. (B) Genotype frequencies of all 12 depth-associated outliers (showing one representative SNP per RAD locus). (C) Genetic differentiation versus expected heterozygosity of all SNPs genotyped for S. intersepta. (D) Genotype frequencies of all four consensus outliers (BayeScan and Fdist, indicated by a black dot) and eight additional outliers (Fdist) with the highest F_ST values. In the scatterplots, colors indicate the outlier category, and frequency distributions of overall F_ST estimates are plotted along the y axis. The dashed line indicates the minimum F_ST at which consensus outliers were identified (for S. intersepta). Genotype frequencies are given for shallow and deep populations, with the hue of stacks indicating genotype (ref/ref, homozygote for the reference allele; ref/alt, heterozygote; alt/alt, homozygote for the alternative allele).