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. 2017 Feb 15;12(2):e0169011. doi: 10.1371/journal.pone.0169011

Table 1. Sequences of the BmHha I, OvGST1a and WbLDR LAMP primers.

a,bBmHha primers: Sequence (5’-3’)
FIP GCTTTTTTTAGTAGTTTTGGCACTTCTTACATTAGACAAGGAAATTGG
BIP GAAAYTAATTGACTATGTTACGTGCACAACACAATATACGACCAGC
F3 GCGCATAAATTCATCAGC
B3 GCAAAACTTAATTACAAAAGCG
LF AATTARAATTAAAATTGATAAAT
LB ATTGTACCAGT
aOvGST1a primers: Sequence (5’-3’)
FIP AATGTTACAGGTAAAGAAGGCATCTTTTGGATATAAACGATGATTTTTCC
BIP ATCAAGCATAAATGGCCTATTAGCGATGAAACAAATTATAGCGCAAAG
F3 CTCAAAATTACAATTTATCTCTTC
B3 TTTGCCAATGAATGGATT
LF ATGAAAGAATTCTATTTTAT
LB GCAAAAATAGAAATGCAT
aWbLDR primers: Sequence (5’-3’)
FIP CGACTGTCTAATCCATTCAGAGTGTATCTGCCCATAGAAATAACTACG
BIP TCTGTGCTGAATTTTTGTGGATTGCCAAACTAATTGTAAGCAGTCTT
F3 TTTGATCATCTGGGAACGT
B3 AAGCACCTTAAATCTGTCAAT
LF ATAACCAGAGATCCAC
LB GTGACGACAACTAGG

aThe primer sets used to target the Brugia Hha I repeat and O. volvulus GST1a were described previously [25, 41]. Loop primers (LF, LB) were added to the original WbLDR primer set [33] to increase amplification speed.

bIn the BmHha I primer set, the degenerate nucleotide Y = C or T and R = A or G.