TABLE 3.
Sample type | No. of samplesa |
% valueb |
κ | |||||||
---|---|---|---|---|---|---|---|---|---|---|
N | PA | NA | FNc | TP | FP | AC | SE | SP | ||
Artificially contaminated | ||||||||||
Loin cut with rind | 25 | 11 | 10 | 3 | 1 | 0 | 84.0 | 85.7 | 100.0 | 0.68 |
Tenderloin | 25 | 13 | 10 | 1 | 0 | 1 | 96.0 | 92.9 | 90.9 | 0.92 |
Shoulder cut | 25 | 14 | 10 | 1 | 0 | 0 | 96.0 | 93.3 | 100.0 | 0.92 |
Total | 75 | 38 | 30 | 5 | 1 | 1 | 92.0 | 90.7 | 96.8 | 0.84 |
Naturally contaminated | ||||||||||
Tongue (paired homogenization) | 50 | 14 | 16 | 10 | 10 | 0 | 60.0 | 100.0 | 100.0 | 0.20 |
Tongue (pooled homogenization) | 15 | 15 | 0 | 0 | 0 | 0 | 100.0 | 100.0 | 100.0 | 1.00 |
Total | 65 | 29 | 16 | 10 | 10 | 0 | 69.2 | 100.0 | 100.0 | 0.41 |
Overall total | 140 | 67 | 46 | 15 | 11 | 1 | 81.4 | 95.1 | 97.9 | 0.64 |
N, total no. of samples per sample type, calculated as PA + NA + FN + TP + FP. PA, positive agreement; NA, negative agreement; FN, false negative (positive result by NMKL 187, negative by rapid method); TP, true positive (confirmed positive result by rapid method, negative by NMKL 187); FP, false positive (negative result by NMKL 187 and positive by rapid method, but not confirmed).
AC, relative accuracy; SE, sensitivity; SP, specificity.
False negative according to NordVal definition, but confirmation showed that with the exception of one tongue sample, all of these were true negatives.