TABLE 2.

Summary of major gene expression differences in the three lacI deletion strains

Locus tag	Protein encoded	SNP (Y/N)	Growth phase	Log2 differential expression
				ΔglyR1–Δhpt	ΔglyR2–Δhpt	ΔglyR3–Δhpt
Clo1313_0089	GlyR2	N	Mid-log	−0.01	Del.a	0.09
			Late log	−0.01	Del.	−0.19
			Early stationary	−1.47	Del.	0.09
Clo1313_0395	CelC	N	Mid-log	−0.12	−0.29	3.89
			Late log	0.03	−0.25	3.82
			Early stationary	−0.65	−0.21	2.53
Clo1313_0396	GlyR3	N	Mid-log	0.12	−0.38	Del.
			Late log	0.44	−0.09	Del.
			Early stationary	−0.67	−0.38	Del.
Clo1313_0397	LicA	N	Mid-log	−0.09	−0.19	3.82
			Late log	0.01	−0.08	3.75
			Early stationary	−0.18	−0.07	2.33
Clo1313_1398	Man5A	N	Mid-log	−0.05	4.65	0.06
			Late log	0.02	4.58	0.06
			Early stationary	−0.08	5.66	0.04
Clo1313_2022	LicB	N	Mid-log	4.33	0.70	0.8
			Late log	4.44	0.47	0.39
			Early stationary	6.64	0.22	0.29
Clo1313_2023	GlyR1	N	Mid-log	Del.	−0.49	−0.27
			Late log	Del.	−0.22	−0.29
			Early stationary	Del.	0.11	0.21

^aDel., deleted (the gene was deleted in that particular strain).