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. 2017 Feb 15;8:3. doi: 10.1186/s13100-017-0086-z

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© The Author(s). 2017

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 6 — Opie population split based on sRNA expression data from leaf tissue. a Relationship between TE age and number of sRNA species (left) or expression (right) calculated per nucleotide of the Opie LTRs and INT domain. Age is cutoff at 3my to allow sufficient visualization of the x-axis. The Spearman r coefficient is shown for each plot, calculated for all elements and not only for those <3my. b Mapping patterns (calculated as in Fig. 3a) of 24 nt expression data along the LTRs of the two distinct Opie subpopulations. sRNA data in A and B were not weighted by their number of genomic loci