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. 2017 Feb 16;7:42808. doi: 10.1038/srep42808

Table 3. Single nucleotide polymorphisms and genes that correlate with trimethoprim resistance.

Feature RF p-value CMH p-value Annotation Gene
267970 4.39E-262 2.51E-13 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
291557 4.19E-57 6.03E-15 Cell division protein ftsL
292017 4.99E-52 2.89E-16 Penicillin binding protein 2x pbpX
291982 9.37E-47 1.34E-16 Penicillin binding protein 2x pbpX
cog_1652 3.01E-198 3.54E-08 ImpB/MucB/SamB family protein
cog_1312 1.79E-58 0.00000173 Macrolide efflux pump
cog_1379 4.39E-85 0.000000119 YolD-like protein
cog_791 3.88E-48 0.00000049 Ribose import ATP-binding protein rbsA
cog_2061 1.41E-90 0.000000119 Hypothetical protein
291286 3.39E-15 7.68E-17 S-adenosyl-methyltransferase MraW mraW
290545 3.38E-26 6.7E-12
1558235 4.29E-19 4.69E-11 Cytidylate kinase cmk
cog_1645 0 0.001967 Cell division initiation protein
cog_2891 0 0.000622 Cell division initiation protein
cog_182 1.49E-25 0.001306 Binding-protein-dependent transport systems inner membrane component
2002234 2.83E-28 6.6E-15 PTS system ascorbate-specific transporter subunit IIC
1459029 5.58E-30 4.56E-12 Asparaginyl-tRNA synthetase asnC
887794 1.4E-27 4.56E-12 DNA polymerase III subunit epsilon
1800425 0.0000387 1.73E-21 DegT/DnrJ/EryC1/StrS family amino sugar synthetase