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. 2017 Feb 16;7:42471. doi: 10.1038/srep42471

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Copyright © 2017, The Author(s)

This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

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Phylogenetic trees based on (A) prophage genomes and (B) prophage sequence typing (PST). Neighbour-joining trees, Kimura two-parameter model, complete deletion option and 1000 resampling using MEGA 6.0 software. Phage population: brown triangles: hpNEurope; pink triangles: hpSWEurope; dark-blue triangles: hpEastAsia; light-blue triangles: hpAfrica1. Hac - Helicobacter acinonychis prophage. χ - highlights recombinogenic prophage genomes.