Table 2.
Locus | Primer name | Sequence | Annealing temperature | References |
---|---|---|---|---|
rbcL | rbcL 1F | ATGTCACCACAAACAGAAAC | 46 | Fay et al. (1998) |
rbcL 724R | TCGCATGTACCTGCAGTAGC | |||
rbcL aF | ATGTCACCACAAACAGAGACTAAAGC | 48 | Levin et al. (2003), Kress et al. (2009) | |
rbcL aR | GTAAAATCAAGTCCACCRCG | |||
matK | mat K 390 | CGATCTATTCATTCAATATTC | 48 | Cuénoud et al. (2002) |
matK 1326 | TCTAGCACACGAAAGTCGAAGT | |||
matK F | ACCCAGTCCATCTGGAAATCTTGGTTC | 50 | Fofana et al. (1997) | |
matK R | CGTACAGTACTTTTGTGTTTACGAG | |||
ITS | ITS 8F | AACAAGGTTTCCGTAGGTGA | 58 | Wen and Zimmer (1996) |
ITS 9R | TATGCTTAAAYTCAGCGGGT | |||
ITS 10F | CGAACACGTTACAATACCG | 55 | ||
ITS 11R | ACCACTTGTCGTGACGTCC | |||
trnLC–trnLD | trnL C | CGAAATCGGTAGACGCTACG | 48.5 | Taberlet et al. (1991) |
trnL D | GGGGATAGAGGGACTTGAAC | |||
trnH–psbA | psbA | GTTATGCATGAACGTAATGCTC | 55 | Sang et al. (1997) |
trnH | CGCGCATGGTGGATTCACAATCC | Tate and Simpson (2003) |