. 2016 Dec 26;23(1):185–196. doi: 10.1007/s12298-016-0403-x

Table 5.

Significant marker-trait associations (MTAs) identified for the phenotypic descriptors

Sl. no.	Trait	Marker	P value	R² value
1	Adherance of leaf sheath	IISR_140_310	0.0018	0.2252
1	Adherance of leaf sheath	IISR_298c_150	0.0084	0.2187
2	Bud cushion	IISR_48_175	0.0070	0.2928
3	Bud groove	IISR_183_1100	0.0044	0.2285
		ESTA70_800	0.0073	0.2816
		ESTB40_150	0.0085	0.2718
4	Bud size	IISR_299_170	0.0062	0.2916
5	Bud-tip in relation to growth ring	IISR_145_1000	0.0071	0.1629
5	Bud-tip in relation to growth ring	ESTA61_280	0.0093	0.2150
6	Colour of dewlap	ESTB134_600	0.0031	0.2943
		IISR_179_375	0.0032	0.2920
		IISR_179_40	0.0096	0.2287
		IISR_9_150	0.0097	0.1603
7	Cross-section	SCA01_1000	0.0024	0.3044
		IISR_281_310	0.0070	0.1731
		SCA01_380	0.0082	0.2340
8	Leaf curvature	IISR_227_130	0.0040	0.3338
		IISR_176c_280	0.0040	0.3338
		IISR_288_220	0.0071	0.2935
		SEGMS40_700	0.0073	0.2083
		IISR_111_300	0.0075	0.2904
		IISR_46a_240	0.0083	0.2003
9	Growth crack (split)	IISR_322_190	0.0092	0.1990
10	Internode colour (exposed to sun)	ESTA70_80	0.0018	0.3054
		ESTA66_210	0.0022	0.2942
		ESTB40_1200	0.0094	0.2144
11	Internode shape	IISR_137_160	0.0077	0.1966
11	Internode shape	SCA01_700	0.0087	0.2684
12	Zig-zag alignment of internode	ESTB135_800	0.0075	0.2753
12	Zig-zag alignment of internode	IISR_116_340	0.0092	0.1846
13	Leaf sheath hairiness	IISR_116_250	0.0020	0.3847
		ESTB145_150	0.0038	0.3374
		IISR_236_300	0.0045	0.2367
14	Pithiness	IISR_281_310	0.0029	0.2528
15	Plant growth habit	IISR_159_270	0.0020	0.3475
		NKS49_400	0.0044	0.2974
		IISR_137_240	0.0059	0.2000
		IISR_81b_130	0.0071	0.2671
		IISR_319_120	0.0074	0.2650
16	Prominence of growth ring	IISR_337_500	0.0074	0.2147
16	Prominence of growth ring	IISR_137_340	0.0087	0.2058
17	Rind surface appearance	IISR_82b_260	0.0020	0.2609
		NKS32_400	0.0063	0.2760
		IISR_267_350	0.0063	0.2752
		NKS50_275	0.0064	0.2746
		U-IISR-WL_250	0.0067	0.2717
18	Shape of bud	ESTB134_200	0.0080	0.2723
19	Shape of inner auricle	IISR_81b_310	0.0020	0.0631
		IISR_306_400	0.0020	0.0631
		ESTB136_400	0.0039	0.0555
20	Shape of ligule	IISR_114_250	0.0041	0.1915
		NKS56_250	0.0049	0.2531
		SCB02_180	0.0058	0.1755
		ESTB147_300	0.0058	0.1755
		SEGMS17_130	0.0088	0.2215
21	Waxiness	SEGMS1020_140	0.0058	0.1931
		IISR_88a_250	0.0061	0.1906
		IISR_335_410	0.0061	0.1906
22	Width of root band	IISR_227_150	0.0013	0.4046
22	Width of root band	IISR_227_120	0.0013	0.4046