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. 2016 Nov 28;45(2):975–986. doi: 10.1093/nar/gkw1165

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© The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 4. — Principal Component analysis. (A) Projection of wild type RecU (RecU_WT: shown in black), ΔNTR mutant RecU (RecU_ΔNTR: shown in red) and their complexes with HJ i.e. (RecU_HJ: shown in green), (RecU_ΔNTR-HJ: shown in blue) along the first two eigenvectors. Sampling along both these eigenvectors is restricted in the presence of HJ. (B) Motion along eigenvector 1 showing rotation of mushroom cap with respect to the the stalk region. Two extreme structures along the direction of the eigenvector are shown in red and blue respectively in a surface representation of a backbone trace. (C) Motion along eigenvector 2 showing rocking of mushroom cap with respect to the stalk region.