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. 2016 Dec 6;45(2):597–605. doi: 10.1093/nar/gkw958

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© The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 1. — The architecture of RPAN. This rice pan-genome browser contains table browser, genome browser and multiple search functions. Table browser allows users to summarize, display and download the contents of tracks. Tree browser can be used to select target genomes which can be displayed as tracks in genome browser. Genome browser contains a reference individual genome as well as those novel sequences not included in the reference genome. Users can also search the pan-genome with a list of genes or accessions, for the presence/absence of the genes in the list of selected rice accessions. Searched results can be displayed in the genome browser as well as in tables and figures.