Table 1.
A list of members of the Conioscyphales, Pleurotheciales, Savoryellales and other fungi, their isolate information and new sequences determined for this study and those retrieved from GenBank. Sequences with GenBank accession numbers in bold were generated for this study. Sequence nuc28S* published in Chew et al. (2010).
| Taxon | Source | ex-type | GenBank accession numbers |
|||||
|---|---|---|---|---|---|---|---|---|
| ITS | nuc28S | nuc18S | RPB2 | MCM7 | TUB2 | |||
| Adelosphaeria catenata | CBS 138679 | T | KT278721 | KT278707 | KT278692 | KT278743 | KT278733 | KT278754 |
| Ascotaiwania lignicola | NIL 00005 | – | HQ446364 | HQ446284 | HQ446419 | – | – | |
| Ascotaiwania limnetica | CBS 126576 | – | – | KT278689 | – | KT278731 | – | |
| CBS 126792 | – | – | KT278690 | – | KT278732 | – | ||
| Ascotaiwania mitriformis | HKUCC 3706 | – | AF132324 | – | – | – | – | |
| Ascotaiwania sawadae | SS 00051 | – | HQ446363 | HQ446283 | HQ446418 | – | – | |
| Ascotaiwania persoonii | A57-14C | T | – | AY094190 | – | – | – | – |
| A57-14C | – | AY590295 | – | – | – | – | ||
| Bactrodesmiastrum obovatum | FMR 6482 | – | FR870266 | – | – | – | – | |
| Bactrodesmiastrum pyriforme | FMR 10747 | – | FR870265 | – | – | – | – | |
| FMR 11931 | – | HE646637 | – | – | – | – | ||
| Brachysporiella setosa | HKUCC 3713 | – | AF132334 | – | – | – | – | |
| Canalisporium caribense | SS 03683 | – | GQ390269 | GQ390254 | – | – | – | |
| Canalisporium elegans | SS 00895 | – | GQ390271 | GQ390256 | HQ446425 | – | – | |
| Canalisporium exiguum | SS 00809 | – | GQ390281 | GQ390266 | HQ446436 | – | – | |
| Canalisporium grenadoideum | BCC 20507 | T | – | GQ390267 | GQ390252 | HQ446420 | – | – |
| Canalisporium pulchrum | SS 03982 | – | GQ390277 | GQ390262 | HQ446431 | – | – | |
| Conioscypha japonica | CBS 387.84 | T | – | AY484514 | JQ437438 | JQ437438 | – | – |
| Conioscypha lignicola | CBS 335.93 | T | – | AY484513 | JQ437439 | JQ429260 | – | – |
| Conioscypha minutispora | CBS 137253 | T | – | KF924559 | – | – | – | – |
| Conioscypha peruviana | ILL 41202 | T | – | KF781539 | – | – | – | – |
| Conioscypha varia | CBS 113653 | – | AY484512 | AY484511 | JQ429261 | – | – | |
| Flammispora bioteca | BCC 13367 | T | – | – | AY722100 | – | – | – |
| Helicoön farinosum | DAOM 241947 | JQ429145 | JQ429230 | – | – | – | – | |
| ILLS 53605 | – | AY094189 | – | – | – | – | ||
| ILLS 53605 | – | AY316357 | – | – | – | – | ||
| Magnisphaera stevemossago | CBS 139776 | – | KT278704 | KT278691 | KT278740 | – | – | |
| Melanotrigonum ovale | CBS 138742 | KT278723 | KT278708 | KT278695 | KT278744 | – | KT278756 | |
| CBS 138743 | T | KT278724 | KT278709 | KT278696 | KT278745 | – | KT278757 | |
| CBS 138744 | KT278725 | KT278710 | KT278697 | KT278746 | – | – | ||
| CBS 138815 | KT278722 | KT278711 | KT278698 | KT278747 | – | KT278755 | ||
| M.R. 3685 | KT278726 | KT278712 | – | KT278748 | – | KT278758 | ||
| Phaeoisaria clematidis | CBS 113340 | EU552148 | – | – | – | – | – | |
| DAOM 226789 | JQ429155 | JQ429231 | JQ429243 | JQ429262 | – | – | ||
| Phaeoisaria fasciculata | CBS 127885 | T | KT278719 | KT278705 | KT278693 | KT278741 | – | KT278752 |
| DAOM 230055 | KT278720 | KT278706 | KT278694 | KT278742 | – | KT278753 | ||
| Phaeoisaria sedimenticola | CGMCC 3.14949 | T | JQ074237 | JQ031561 | – | – | – | – |
| Phaeoisaria sparsa | FMR 11939 | – | HF677185 | – | – | – | – | |
| Phaeoisaria sp. | unknown | – | nuc28S* | – | – | – | – | |
| Phragmocephala stemphylioides | DAOM 673211 | KT278730 | KT278717 | – | – | – | – | |
| Pisorisporium cymbiforme | CBS 127887 | – | – | KT278699 | KT278750 | – | – | |
| CBS 127888 | – | – | KT278700 | KT278751 | – | – | ||
| Plagiascoma frondosum | CBS 139031 | T | – | KT278713 | KT278701 | KT278749 | KT278734 | – |
| Pleurotheciella centenaria | DAOM 229631 | T | JQ429151 | JQ429234 | JQ429246 | JQ429265 | – | – |
| Pleurotheciella rivularia | CBS 125238 | T | JQ429160 | JQ429232 | JQ429244 | JQ429263 | KT278735 | KT278759 |
| CBS 125237 | JQ429161 | JQ429233 | JQ429245 | JQ429264 | KT278736 | KT278760 | ||
| Pleurotheciella uniseptata | DAOM 673210 | T | KT278729 | KT278716 | – | – | – | – |
| Pleurothecium obovoideum | CBS 209.95 | T | EU041784 | EU041841 | – | – | – | – |
| Pleurothecium recurvatum | CBS 101581 | JQ429148 | AF261070 | JQ429248 | JQ429266 | – | – | |
| CBS 138747 | KT278728 | KT278714 | KT278703 | – | – | – | ||
| CBS 138686 | KT278727 | KT278715 | KT278702 | – | KT278737 | – | ||
| CBS 131646 | JQ429150 | JQ429236 | JQ429250 | – | – | – | ||
| CBS 131272 | JQ429149 | JQ429237 | JQ429251 | JQ429268 | – | – | ||
| Pleurothecium semifecundum | CBS 131271 | T | JQ429159 | JQ429240 | JQ429254 | JQ429270 | – | – |
| CBS 131482 | JQ429158 | JQ429239 | JQ429253 | – | – | – | ||
| Savoryella appendiculata | NF 00206 | – | – | HQ446293 | HQ446442 | – | – | |
| Savoryella aquatica | SS 03801 | – | HQ446372 | HQ446290 | HQ446441 | – | – | |
| Savoryella lignicola | NF 00204 | – | HQ446378 | HQ446299 | – | – | – | |
| Savoryella longispora | SAT 00322 | – | HQ446380 | HQ446302 | HQ446450 | – | – | |
| Savoryella paucispora | SAT 00866 | – | HQ446381 | HQ446303 | HQ446451 | – | – | |
| Savoryella verrucosa | SS 00052 | – | HQ446374 | HQ446298 | HQ446445 | – | – | |
| Sterigmatobotrys macrocarpa | PRM 915682 | JQ429153 | GU017317 | JQ429255 | – | KT278739 | KT278762 | |
| DAOM 230059 | JQ429154 | GU017316 | – | JQ429271 | KT278738 | KT278761 | ||
| Sterigmatobotrys uniseptata | FMR 11937 | HF677178 | – | – | – | – | – | |
| Taeniolella rudis | DAOM 229838 | JQ429152 | JQ429241 | JQ429256 | JQ429272 | – | – | |
| Triadelphia uniseptata | DAOMC 250376 | – | KT278718 | – | – | – | – | |