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. 2017 Feb 3;13(2):e1006604. doi: 10.1371/journal.pgen.1006604

Table 1. Frequency of DLA-DRB1/-DQA1/-DQB1 haplotypes in collies and Shetland sheepdogs.

COLLIE
DLA-DRB1*/-DQA1*/-DQB1* Cases (2n = 80) Controls (2n = 370) OR 95% CI P-value
002:01/009:01/001:01 74 353 0.59 0.23–1.56 0.40
006:01/050:11/007:01 0 3 - - -
015:01/009:01/001:01 6 14 2.06 0.77–5.54 0.23
SHETLAND SHEEPDOG
DLA-DRB1*/-DQA1*/-DQB1* Cases (2n = 184) Controls (2n = 410) OR 95% CI P-value
002:01/009:01/001:01 158 301 2.20 1.38–3.52 0.0010
015:01/009:01/001:01 1 6 0.37 0.04–3.08 0.4454
023:01/003:01/005:01 24 102 0.45 0.28–0.73 0.0011
Other haplotypes 1 1 - - -

The number of times each haplotype was observed is reported for cases and controls with odds ratios (OR), 95% confidence intervals, and Fisher’s exact two-tailed P-values. Significant statistics are bolded.

71 out of 92 cases and 109 out of 205 controls were homozygous for the 002:01/009:01/001:01 haplotype (OR = 2.98, 95% CI = 1.70–5.21, P-val = 0.0001).