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. Author manuscript; available in PMC: 2017 Feb 19.
Published in final edited form as: Anal Chem. 2016 Sep 28;88(20):10215–10222. doi: 10.1021/acs.analchem.6b02886

Figure 2.

Figure 2

The scheme to identify inter-cross-linked (top) and dead-end peptides (bottom) by CID and ETD tandem mass spectrometry. MS3 can be used for CID-only identification. Both CID and ETD will identify peptide sequence without further MS/MS.