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. 2017 Feb 20;7:42737. doi: 10.1038/srep42737

Table 1. Details of thee fungal isolates, plant and soil samples used in the LAMP detection assay.

Samples Collection site State LAMP detection
 Conventional PCR
Florescence Agarose gel RB_F3/RB_B3 ITS1/ITS4
R. bataticola isolates (chickpea)
 RB1 Kanpur Uttar Pradesh + + + +
 RB2 Coimbatore Tamil Nadu + + + +
 RB3 ICRISAT, BIL 01 Andhra Pradesh + + + +
 RB4 ICRISAT, BIL 01 Andhra Pradesh + + + +
 RB5 ICRISAT, BP 4 Andhra Pradesh + + + +
 RB6 ICRISAT, BP 10 Andhra Pradesh + + + +
 RB7 ICRISAT, BIL 01 Andhra Pradesh + + + +
 RB8 ICRISAT, BUS 03 Andhra Pradesh + + + +
 RB9 ICRISAT, BR 05 Andhra Pradesh + + + +
 RB10 ICRISAT, BIL 02 Andhra Pradesh + + + +
 RB11 ICRISAT, BIL 02 Andhra Pradesh + + + +
 RB12 Pati Andhra Pradesh + + + +
 RB13 ICRISAT, BP 02 Andhra Pradesh + + + +
 RB14 Jodhpur Madhya Pradesh + + + +
 RB15 Jabalpur Madhya Pradesh + + + +
 RB16 Delhi Delhi + + + +
 RB17 Damoh 1 Madhya Pradesh + + + +
 RB18 Damoh 2 Madhya Pradesh + + + +
 RB19 Damoh 3 Madhya Pradesh + + + +
 RB20 Damoh 4 Madhya Pradesh + + + +
 RB21 Damoh 5 Madhya Pradesh + + + +
 RB22 Damoh 6 Madhya Pradesh + + + +
 RB23 Damoh 7 Madhya Pradesh + + + +
 RB24 ICRISAT, BUS 04 Andhra Pradesh + + + +
 RB25 ICRISAT, BUS 07 Andhra Pradesh + + + +
 RB26 ICRISAT, BIL 02 Andhra Pradesh + + + +
 RB27 ICRISAT, BUS 07 Andhra Pradesh + + + +
 RB28 ICRISAT, BR 04H Andhra Pradesh + + + +
 RB29 ICRISAT, BUS 03 Andhra Pradesh + + + +
 RB30 ICRISAT, BIL 02D Andhra Pradesh + + + +
 RB31 ICRISAT, BUS 03 Andhra Pradesh + + + +
 RB32 ICRISAT, BIL 05 Andhra Pradesh + + + +
 RB33 ICRISAT, BP 04 Andhra Pradesh + + + +
 RB34 ICRISAT, BR 05D Andhra Pradesh + + + +
 RB35 ICRISAT, BUS 03 Andhra Pradesh + + + +
 RB36 ICRISAT, BR 04F Andhra Pradesh + + + +
 RB37 ICRISAT, BP 04 Andhra Pradesh + + + +
 RB38 ICRISAT, BR 04F Andhra Pradesh + + + +
 RB39 ICRISAT, BM 14 Andhra Pradesh + + + +
 RB40 ICRISAT, BR 04 Andhra Pradesh + + + +
 RB41 ICRISAT, BP 04 Andhra Pradesh + + + +
 RB42 ICRISAT, BR 04F Andhra Pradesh + + + +
 RB43 ICRISAT, BW 01A Andhra Pradesh + + + +
 RB44 ICRISAT, BIL 01 Andhra Pradesh + + + +
 RB45 ICRISAT, BW 03 Andhra Pradesh + + + +
 RB46 ICRISAT, BW 04 Andhra Pradesh + + + +
 RB47 ICRISAT, BR 04I Andhra Pradesh + + + +
 RB48 ICRISAT, BR 04H Andhra Pradesh + + + +
 RB49 Jabalpur 1 Madhya Pradesh + + + +
 RB50 Jabalpur 5 Madhya Pradesh + + + +
 RB51 Jabalpur 6 Madhya Pradesh + + + +
 RB52 Jabalpur 8 Madhya Pradesh + + + +
 RB53 Brampuri, Damoh 8 Madhya Pradesh + + + +
 RB54 Brampuri, Damoh 9 Madhya Pradesh + + + +
 RB55 Katni Madhya Pradesh + + + +
 RB56 JNKVV, Jabalpur Madhya Pradesh + + + +
 RB57 Rewa Madhya Pradesh + + + +
 RB58 Bachara. Satna Madhya Pradesh + + + +
 RB59 IIPR, Kanpur Uttar Pradesh + + + +
 RB60 ICRISAT, BIL 02 Andhra Pradesh + + + +
 RB61 Dhaulakuan Himachal Pradesh + + + +
 RB62 Ramnagar, Pantnagar Uttarakhand + + + +
 RB63 BAU, Ranchi Jharkhand + + + +
 RB64 ICRISAT, BP 02C Andhra Pradesh + + + +
 RB65 ICRISAT, BP 15 Andhra Pradesh + + + +
 RB66 ICRISAT, BP 03B Andhra Pradesh + + + +
 RB67 ICRISAT, BP 03C Andhra Pradesh + + + +
 RB68 ICRISAT, BP 08A Andhra Pradesh + + + +
 RB69 ICRISAT, BP 08B Andhra Pradesh + + + +
 RB70 ICRISAT, BR 05D Andhra Pradesh + + + +
 RB71 ICRISAT, BR 05B Andhra Pradesh + + + +
 RB72 ICRISAT, BL 04A Andhra Pradesh + + + +
 RB73 ICRISAT, BL0 4 Andhra Pradesh + + + +
 RB74 ICRISAT, BM 13 Andhra Pradesh + + + +
 RB75 ICRISAT, BM 13 Andhra Pradesh + + + +
 RB76 ICRISAT, BM 08C Andhra Pradesh + + + +
 RB77 ICRISAT, BW 02A Andhra Pradesh + + + +
 RB78 ICRISAT, BW 02B Andhra Pradesh + + + +
 RB79 ICRISAT, BW 02C Andhra Pradesh + + + +
 RB80 ICRISAT, BW 04A Andhra Pradesh + + + +
 RB81 ICRISAT, BW 05A Andhra Pradesh + + + +
 RB82 ICRISAT, BW 05B Andhra Pradesh + + + +
 RB83 ICRISAT, BW 08 Andhra Pradesh + + + +
 RB84 ICRISAT, BIL 01 Andhra Pradesh + + + +
 RB85 ICRISAT, BIL 01 Andhra Pradesh + + + +
 RB86 ICRISAT, BIL 01 Andhra Pradesh + + + +
 RB87 ICRISAT, BIL 03C Andhra Pradesh + + + +
 RB88 ICRISAT, BIL 03 Andhra Pradesh + + + +
 RB89 ICRISAT, BIL 04 Andhra Pradesh + + + +
 RB90 ICRISAT, BIL 05B Andhra Pradesh + + + +
 RB91 ICRISAT, BIL 05C Andhra Pradesh + + + +
 RB92 ICRISAT, BIL 05C Andhra Pradesh + + + +
 RB93 ICRISAT, JM 08B Andhra Pradesh + + + +
 RB94 ICRISAT, BR 05C Andhra Pradesh + + + +
DRR infected chickpea plants (field)
 Sample 1 ICRISAT, BIL 02 Andhra Pradesh + + + +
 Sample 2 ICRISAT, BW 08 Andhra Pradesh + + + +
 Sample 3 ICRISAT, BM 13 Andhra Pradesh + + + +
 Sample 4 ICRISAT, BP 15 Andhra Pradesh + + + +
 Sample 5 ICRISAT, BIL 01 Andhra Pradesh + + + +
 Healthy ICRISAT, BIL 02 Andhra Pradesh − − − −
DRR infected chickpea plants (greenhouse)
 Sample 1 Experimental sample ICRISAT + + + +
 Sample 2 Experimental sample ICRISAT + + + +
 Sample 3 Experimental sample ICRISAT + + + +
 Sample 4 Experimental sample ICRISAT + + + +
 Healthy Experimental sample ICRISAT − − − −
Sick soil (DRR)
 Rhizospheric black soil ICRISAT, BP 04 Andhra Pradesh + + + MBa
 Rhizospheric red soil ICRISAT, RL17 Andhra Pradesh + + + MB
 Sick soil (non-rhizospheric) Experimental sick plot ICRISAT + + + +
Other fungal pathogens
 F. oxysporum f. sp. ciceris (chickpea) In vitro culture ICRISAT − − − +
 R. solani (chickpea) In vitro culture ICRISAT − − − +
 S. rolfsii (chickpea) In vitro culture ICRISAT − − − +
 F. solani (chickpea) In vitro culture ICRISAT − − − +
 F. udum (pigeonpea) In vitro culture ICRISAT − − − +
 P. cajani (pigeonpea) In vitro culture ICRISAT − − − +

aMultiple bands.