Table 2. Genera with a greater relative abundance associated with native sites and encroaching sites under shrub and herbaceous level treatment to have a significant effect based on Indicator Species Analysis (P-value < 0.05).

Types	Phylum	Class	Order	Family	Genus	N (%)	E (%)	Up/down regulation	P
S	Proteobacteria	Alphaproteobacteria	Rhizobiales	Hyphomicrobiaceae	Devosia	0.019	0.117	+	0.025
	Proteobacteria	Gammaproteobacteria	Enterobacteriales	Enterobacteriaceae	Dokdonella	0.004	0.048	+	0.026
	Proteobacteria	Deltaproteobacteria	Myxococcales	Phaselicystidaceae	Phaselicystis	0.023	0.103	+	0.008
	Proteobacteria	Alphaproteobacteria	Rhodobacterales	Rhodobacteraceae	Rhodobacter	0	0.053	+	0.044
	Actinobacteria	Actinobacteria	Solirubrobacterales	Conexibacteraceae	Conexibacter	1.196	0.874	−	0.040
	Actinobacteria	Actinobacteria	Actinomycetales	Nakamurellaceae	Nakamurella	0.006	0.098	+	0.010
	Actinobacteria	Actinobacteria	Actinomycetales	Streptosporangiaceae	Streptosporangium	0	0.015	+	0.042
	Gemmatimonadetes	Gemmatimonadetes	Gemmatimonadales	Gemmatimonadaceae	Gemmatimonas	0.363	0.727	+	0.018
	Parcubacteria	/	/	/	Parcubacteria	0.024	0.009	−	0.042
	Verrucomicrobia	Subdivision3	/	/	Subdivision3	0.059	0.017	−	0.050
H	Proteobacteria	Alphaproteobacteria	Caulobacterales	Caulobacteraceae	Asticcacaulis	0.003	0.010	+	0.045
	Acidobacteria	Acidobacteria	/	/	Granulicella	0.629	1.124	+	0.017

S indicates shrub level and H indicates herbaceous level.